Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 AC007952.6-201ENST00000573168 2673 ntBASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 AC003957.1-201ENST00000625108 2673 ntBASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 AC121338.2-201ENST00000622535 1744 ntBASIC19■□□□□ 0.63
LSMEM1Q8N8F7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LSMEM1Q8N8F7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 PKD1P6-201ENST00000343738 4769 ntBASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 YBX1P1-201ENST00000445822 960 ntBASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 TERF1P2-201ENST00000583350 1212 ntBASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LSMEM1Q8N8F7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSMEM1Q8N8F7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 KRT16P2-201ENST00000414673 1423 ntBASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSMEM1Q8N8F7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSMEM1Q8N8F7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms