Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C3orf56Q8N813 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C3orf56Q8N813 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.28■□□□□ 0.2
C3orf56Q8N813 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.28■□□□□ 0.2
C3orf56Q8N813 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
C3orf56Q8N813 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C3orf56Q8N813 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C3orf56Q8N813 AL049637.2-201ENST00000641778 930 ntBASIC16.28■□□□□ 0.2
C3orf56Q8N813 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C3orf56Q8N813 AC061975.6-201ENST00000579045 1553 ntBASIC16.28■□□□□ 0.2
C3orf56Q8N813 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
C3orf56Q8N813 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.28■□□□□ 0.2
C3orf56Q8N813 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.28■□□□□ 0.2
C3orf56Q8N813 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 KRT18P68-201ENST00000392293 1000 ntBASIC16.27■□□□□ 0.2
C3orf56Q8N813 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
C3orf56Q8N813 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C3orf56Q8N813 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C3orf56Q8N813 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C3orf56Q8N813 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.27■□□□□ 0.19
C3orf56Q8N813 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
C3orf56Q8N813 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C3orf56Q8N813 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C3orf56Q8N813 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 ABCB10P4-201ENST00000566803 2184 ntBASIC16.26■□□□□ 0.19
C3orf56Q8N813 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 TMPOP1-202ENST00000424642 1267 ntBASIC16.26■□□□□ 0.19
C3orf56Q8N813 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C3orf56Q8N813 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.26■□□□□ 0.19
C3orf56Q8N813 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 RCN1P1-201ENST00000400413 996 ntBASIC16.25■□□□□ 0.19
C3orf56Q8N813 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 AC245052.3-201ENST00000450182 901 ntBASIC16.25■□□□□ 0.19
C3orf56Q8N813 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C3orf56Q8N813 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.25■□□□□ 0.19
C3orf56Q8N813 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 AC239809.2-201ENST00000415381 517 ntBASIC16.24■□□□□ 0.19
C3orf56Q8N813 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms