Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 KRT17P3-201ENST00000420566 1262 ntBASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPAS4Q8IUM7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 RPPH1-201ENST00000516869 333 ntBASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPAS4Q8IUM7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.39■■□□□ 1.18
NPAS4Q8IUM7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.39■■□□□ 1.18
NPAS4Q8IUM7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
NPAS4Q8IUM7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 C1QBPP2-201ENST00000528754 825 ntBASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 SOX15-203ENST00000570788 1093 ntBASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 AC105020.6-201ENST00000621523 1217 ntBASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 FAM197Y4-202ENST00000622692 608 ntBASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NPAS4Q8IUM7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 C9orf163-202ENST00000624034 2573 ntBASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 RN7SL471P-201ENST00000580476 299 ntBASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NPAS4Q8IUM7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 MIR718-201ENST00000390190 70 ntBASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms