Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TUBA1AQ71U36 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TUBA1AQ71U36 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TUBA1AQ71U36 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TUBA1AQ71U36 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 AC010141.3-201ENST00000456659 717 ntBASIC19.06■□□□□ 0.64
TUBA1AQ71U36 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 AC087239.1-201ENST00000622671 572 ntBASIC19.06■□□□□ 0.64
TUBA1AQ71U36 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TUBA1AQ71U36 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 IRS3P-201ENST00000223076 1006 ntBASIC19.05■□□□□ 0.64
TUBA1AQ71U36 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TUBA1AQ71U36 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 AC068587.7-201ENST00000641602 218 ntBASIC19.04■□□□□ 0.64
TUBA1AQ71U36 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBA1AQ71U36 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms