Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L2-201ENST00000561772 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L6-201ENST00000626483 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L1-201ENST00000627662 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L8-201ENST00000629013 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L3-201ENST00000630187 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L7-201ENST00000630678 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DUX4L5-201ENST00000630834 1275 ntBASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST2H3AQ71DI3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HIST2H3AQ71DI3 PLK5-205ENST00000642079 1969 ntBASIC18.21■□□□□ 0.5
HIST2H3AQ71DI3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 AP001160.3-201ENST00000601484 763 ntBASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 AC121338.2-201ENST00000622535 1744 ntBASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST2H3AQ71DI3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 AC006128.1-201ENST00000624704 1661 ntBASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 KRT18P20-201ENST00000548986 1279 ntBASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 AC004854.2-201ENST00000608450 1441 ntBASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 RARRES2P11-201ENST00000635158 484 ntBASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST2H3AQ71DI3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms