Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
HIST2H2AA3Q6FI13 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 KRT19P1-201ENST00000405746 1186 ntBASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 AC097381.1-201ENST00000429019 1296 ntBASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 AC034268.1-201ENST00000441047 882 ntBASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 KRT18P20-201ENST00000548986 1279 ntBASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.05■□□□□ 0.8
HIST2H2AA3Q6FI13 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 AC004854.2-201ENST00000608450 1441 ntBASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HIST2H2AA3Q6FI13 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 AC019069.1-201ENST00000610008 1333 ntBASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 MIR6821-201ENST00000617625 74 ntBASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST2H2AA3Q6FI13 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 AC245052.3-201ENST00000450182 901 ntBASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST2H2AA3Q6FI13 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.02■□□□□ 0.79
HIST2H2AA3Q6FI13 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.02■□□□□ 0.79
HIST2H2AA3Q6FI13 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HIST2H2AA3Q6FI13 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HIST2H2AA3Q6FI13 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 AC121338.2-201ENST00000622535 1744 ntBASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIST2H2AA3Q6FI13 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms