Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 SLC47A1P1-202ENST00000449666 945 ntBASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 SERBP1P1-201ENST00000396021 1160 ntBASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 AC136469.2-201ENST00000623944 1028 ntBASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 AL162377.1-201ENST00000618844 1793 ntBASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00242Q5T6M2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 SYT6-210ENST00000641643 1587 ntBASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 AC112907.3-201ENST00000577781 2400 ntBASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00242Q5T6M2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 AL512408.1-201ENST00000569378 2000 ntBASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 FP700111.2-201ENST00000619190 1892 ntBASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 DUX4L19-201ENST00000557448 1267 ntBASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 SMUG1P1-201ENST00000590640 811 ntBASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LINC00242Q5T6M2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms