Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YOR072W-AYOR072W-A 249 nt1.72□□□□□ -2.13
RKR1Q04781 YPR146CYPR146C 330 nt1.72□□□□□ -2.13
RKR1Q04781 BEM2YER155C 6504 nt1.72□□□□□ -2.13
RKR1Q04781 RRP8YDR083W 1179 nt1.72□□□□□ -2.13
RKR1Q04781 YER023C-AYER023C-A 213 nt1.72□□□□□ -2.13
RKR1Q04781 APA1YCL050C 966 nt1.72□□□□□ -2.13
RKR1Q04781 MIC60YKR016W 1623 nt1.71□□□□□ -2.13
RKR1Q04781 UTP25YIL091C 2166 nt1.71□□□□□ -2.14
RKR1Q04781 GPM2YDL021W 936 nt1.71□□□□□ -2.14
RKR1Q04781 MCM22YJR135C 720 nt1.71□□□□□ -2.14
RKR1Q04781 RKM1YPL208W 1752 nt1.7□□□□□ -2.14
RKR1Q04781 AFI1YOR129C 2682 nt1.7□□□□□ -2.14
RKR1Q04781 ENP2YGR145W 2124 nt1.7□□□□□ -2.14
RKR1Q04781 GRE2YOL151W 1029 nt1.7□□□□□ -2.14
RKR1Q04781 HKR1YDR420W 5409 nt1.7□□□□□ -2.14
RKR1Q04781 PRT1YOR361C 2292 nt1.69□□□□□ -2.14
RKR1Q04781 PKH2YOL100W 3246 nt1.69□□□□□ -2.14
RKR1Q04781 AAR2YBL074C 1068 nt1.68□□□□□ -2.14
RKR1Q04781 YBR174CYBR174C 315 nt1.68□□□□□ -2.14
RKR1Q04781 SPE1YKL184W 1401 nt1.68□□□□□ -2.14
RKR1Q04781 DFG16YOR030W 1860 nt1.68□□□□□ -2.14
RKR1Q04781 IMG2YCR071C 441 nt1.68□□□□□ -2.14
RKR1Q04781 YOL014WYOL014W 375 nt1.68□□□□□ -2.14
RKR1Q04781 SLM4YBR077C 489 nt1.68□□□□□ -2.14
RKR1Q04781 YBR255C-AYBR255C-A 363 nt1.68□□□□□ -2.14
RKR1Q04781 LAP3YNL239W 1365 nt1.67□□□□□ -2.14
RKR1Q04781 YJL113WYJL113W 4647 nt1.67□□□□□ -2.14
RKR1Q04781 YLR035C-AYLR035C-A 3468 nt1.67□□□□□ -2.14
RKR1Q04781 IST2YBR086C 2841 nt1.67□□□□□ -2.14
RKR1Q04781 RTT105YER104W 627 nt1.67□□□□□ -2.14
RKR1Q04781 RPS0BYLR048W 759 nt1.67□□□□□ -2.14
RKR1Q04781 TAZ1YPR140W 1146 nt1.67□□□□□ -2.14
RKR1Q04781 ASG1YIL130W 2895 nt1.67□□□□□ -2.14
RKR1Q04781 GPI17YDR434W 1605 nt1.66□□□□□ -2.14
RKR1Q04781 TCM62YBR044C 1719 nt1.66□□□□□ -2.14
RKR1Q04781 COS3YML132W 1140 nt1.66□□□□□ -2.14
RKR1Q04781 ATX2YOR079C 942 nt1.66□□□□□ -2.14
RKR1Q04781 CBP6YBR120C 489 nt1.66□□□□□ -2.14
RKR1Q04781 COS2YBR302C 1140 nt1.66□□□□□ -2.14
RKR1Q04781 SPT7YBR081C 3999 nt1.66□□□□□ -2.14
RKR1Q04781 MES1YGR264C 2256 nt1.66□□□□□ -2.14
RKR1Q04781 YDR179W-AYDR179W-A 1392 nt1.65□□□□□ -2.15
RKR1Q04781 YDR336WYDR336W 945 nt1.65□□□□□ -2.15
RKR1Q04781 YGR111WYGR111W 1203 nt1.65□□□□□ -2.15
RKR1Q04781 tT(UGU)HtT(UGU)H 72 nt1.65□□□□□ -2.15
RKR1Q04781 TAF14YPL129W 735 nt1.65□□□□□ -2.15
RKR1Q04781 SNF12YNR023W 1701 nt1.65□□□□□ -2.15
RKR1Q04781 CLB4YLR210W 1383 nt1.64□□□□□ -2.15
RKR1Q04781 YFR045WYFR045W 930 nt1.64□□□□□ -2.15
RKR1Q04781 UTP8YGR128C 2142 nt1.64□□□□□ -2.15
RKR1Q04781 BRO1YPL084W 2535 nt1.64□□□□□ -2.15
RKR1Q04781 KEI1YDR367W 666 nt1.64□□□□□ -2.15
RKR1Q04781 YET1YKL065C 621 nt1.64□□□□□ -2.15
RKR1Q04781 PTC5YOR090C 1719 nt1.63□□□□□ -2.15
RKR1Q04781 YMR160WYMR160W 2451 nt1.63□□□□□ -2.15
RKR1Q04781 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
RKR1Q04781 RPN5YDL147W 1338 nt1.62□□□□□ -2.15
RKR1Q04781 SKI8YGL213C 1194 nt1.62□□□□□ -2.15
RKR1Q04781 YAE1YJR067C 426 nt1.62□□□□□ -2.15
RKR1Q04781 EGD1YPL037C 474 nt1.62□□□□□ -2.15
RKR1Q04781 BUD3YCL014W 4911 nt1.62□□□□□ -2.15
RKR1Q04781 FMP48YGR052W 1110 nt1.61□□□□□ -2.15
RKR1Q04781 YMR175W-AYMR175W-A 195 nt1.61□□□□□ -2.15
RKR1Q04781 AHC1YOR023C 1701 nt1.6□□□□□ -2.15
RKR1Q04781 RPS29AYLR388W 171 nt1.6□□□□□ -2.15
RKR1Q04781 TIM18YOR297C 579 nt1.6□□□□□ -2.15
RKR1Q04781 HFM1YGL251C 3564 nt1.6□□□□□ -2.15
RKR1Q04781 SUR1YPL057C 1149 nt1.59□□□□□ -2.15
RKR1Q04781 SWI4YER111C 3282 nt1.59□□□□□ -2.15
RKR1Q04781 RLI1YDR091C 1827 nt1.59□□□□□ -2.16
RKR1Q04781 YJU2YKL095W 837 nt1.59□□□□□ -2.16
RKR1Q04781 RPH1YER169W 2391 nt1.59□□□□□ -2.16
RKR1Q04781 YIL080WYIL080W 4722 nt1.59□□□□□ -2.16
RKR1Q04781 ULP2YIL031W 3105 nt1.59□□□□□ -2.16
RKR1Q04781 PET127YOR017W 2403 nt1.58□□□□□ -2.16
RKR1Q04781 PBY1YBR094W 2262 nt1.58□□□□□ -2.16
RKR1Q04781 MCM21YDR318W 1107 nt1.58□□□□□ -2.16
RKR1Q04781 INA17YPL099C 549 nt1.58□□□□□ -2.16
RKR1Q04781 ALG1YBR110W 1350 nt1.58□□□□□ -2.16
RKR1Q04781 FRQ1YDR373W 573 nt1.57□□□□□ -2.16
RKR1Q04781 CDC37YDR168W 1521 nt1.57□□□□□ -2.16
RKR1Q04781 LSM6YDR378C 261 nt1.56□□□□□ -2.16
RKR1Q04781 YHR182C-AYHR182C-A 474 nt1.56□□□□□ -2.16
RKR1Q04781 YPT52YKR014C 705 nt1.56□□□□□ -2.16
RKR1Q04781 IST1YNL265C 897 nt1.56□□□□□ -2.16
RKR1Q04781 MPD2YOL088C 834 nt1.56□□□□□ -2.16
RKR1Q04781 YCL046WYCL046W 324 nt1.56□□□□□ -2.16
RKR1Q04781 SMC4YLR086W 4257 nt1.56□□□□□ -2.16
RKR1Q04781 MIG1YGL035C 1515 nt1.56□□□□□ -2.16
RKR1Q04781 YDL211CYDL211C 1119 nt1.55□□□□□ -2.16
RKR1Q04781 IRC6YFR043C 714 nt1.55□□□□□ -2.16
RKR1Q04781 TDA10YGR205W 873 nt1.55□□□□□ -2.16
RKR1Q04781 YMR242W-AYMR242W-A 90 nt1.55□□□□□ -2.16
RKR1Q04781 TFC8YPL007C 1767 nt1.55□□□□□ -2.16
RKR1Q04781 ARG3YJL088W 1017 nt1.55□□□□□ -2.16
RKR1Q04781 TYE7YOR344C 876 nt1.55□□□□□ -2.16
RKR1Q04781 YNL276CYNL276C 396 nt1.53□□□□□ -2.16
RKR1Q04781 YCT1YLL055W 1596 nt1.53□□□□□ -2.16
RKR1Q04781 DSE4YNR067C 3354 nt1.53□□□□□ -2.17
RKR1Q04781 YIL020C-AYIL020C-A 339 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms