Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 RTS3YGR161C 792 nt3.99□□□□□ -1.77
NPL3Q01560 YIL046W-AYIL046W-A 165 nt3.99□□□□□ -1.77
NPL3Q01560 HIT1YJR055W 495 nt3.99□□□□□ -1.77
NPL3Q01560 RIO2YNL207W 1278 nt3.99□□□□□ -1.77
NPL3Q01560 YOR392WYOR392W 444 nt3.99□□□□□ -1.77
NPL3Q01560 snR54snR54 86 nt3.99□□□□□ -1.77
NPL3Q01560 YNL193WYNL193W 1677 nt3.99□□□□□ -1.77
NPL3Q01560 YMR018WYMR018W 1545 nt3.99□□□□□ -1.77
NPL3Q01560 YKR078WYKR078W 1758 nt3.99□□□□□ -1.77
NPL3Q01560 YDR061WYDR061W 1620 nt3.99□□□□□ -1.77
NPL3Q01560 MUD2YKL074C 1584 nt3.98□□□□□ -1.77
NPL3Q01560 HFD1YMR110C 1599 nt3.98□□□□□ -1.77
NPL3Q01560 CDC14YFR028C 1656 nt3.98□□□□□ -1.77
NPL3Q01560 HRD1YOL013C 1656 nt3.98□□□□□ -1.77
NPL3Q01560 FKH2YNL068C 2589 nt3.98□□□□□ -1.77
NPL3Q01560 YIL014C-AYIL014C-A 315 nt3.98□□□□□ -1.77
NPL3Q01560 YMR013C-AYMR013C-A 150 nt3.98□□□□□ -1.77
NPL3Q01560 MSS18YPR134W 807 nt3.98□□□□□ -1.77 RIP-Chip
NPL3Q01560 ARR2YPR200C 393 nt3.98□□□□□ -1.77
NPL3Q01560 YBR209WYBR209W 318 nt3.98□□□□□ -1.77
NPL3Q01560 HAA1YPR008W 2085 nt3.98□□□□□ -1.77
NPL3Q01560 MPS1YDL028C 2295 nt3.97□□□□□ -1.77
NPL3Q01560 PCK1YKR097W 1650 nt3.97□□□□□ -1.77
NPL3Q01560 YHR214C-CYHR214C-C 1437 nt3.97□□□□□ -1.77
NPL3Q01560 RIA1YNL163C 3333 nt3.97□□□□□ -1.77
NPL3Q01560 PIM1YBL022C 3402 nt3.97□□□□□ -1.77
NPL3Q01560 CPA2YJR109C 3357 nt3.97□□□□□ -1.77
NPL3Q01560 YCR018C-AYCR018C-A 255 nt3.97□□□□□ -1.77 RIP-Chip
NPL3Q01560 SPC19YDR201W 498 nt3.97□□□□□ -1.77
NPL3Q01560 GPI19YDR437W 423 nt3.97□□□□□ -1.77 RIP-Chip
NPL3Q01560 CDC26YFR036W 375 nt3.97□□□□□ -1.77 RIP-Chip
NPL3Q01560 YJL169WYJL169W 369 nt3.97□□□□□ -1.77
NPL3Q01560 MCR1YKL150W 909 nt3.97□□□□□ -1.77
NPL3Q01560 YML108WYML108W 318 nt3.97□□□□□ -1.77
NPL3Q01560 RPL13BYMR142C 600 nt3.97□□□□□ -1.77
NPL3Q01560 YPL197CYPL197C 414 nt3.97□□□□□ -1.77
NPL3Q01560 HOS3YPL116W 2094 nt3.97□□□□□ -1.77
NPL3Q01560 TRK1YJL129C 3708 nt3.97□□□□□ -1.77
NPL3Q01560 BI4Q0120 1917 nt3.96□□□□□ -1.78
NPL3Q01560 ILV5YLR355C 1188 nt3.96□□□□□ -1.78
NPL3Q01560 YMR304C-AYMR304C-A 351 nt3.96□□□□□ -1.78
NPL3Q01560 YPL225WYPL225W 441 nt3.96□□□□□ -1.78
NPL3Q01560 MAK5YBR142W 2322 nt3.96□□□□□ -1.78
NPL3Q01560 PAM1YDR251W 2493 nt3.96□□□□□ -1.78
NPL3Q01560 PDR12YPL058C 4536 nt3.96□□□□□ -1.78
NPL3Q01560 ATG2YNL242W 4779 nt3.95□□□□□ -1.78
NPL3Q01560 EMC1YCL045C 2283 nt3.95□□□□□ -1.78
NPL3Q01560 HMRA2YCR096C 360 nt3.95□□□□□ -1.78 RIP-Chip
NPL3Q01560 YDL009CYDL009C 324 nt3.95□□□□□ -1.78
NPL3Q01560 RTR2YDR066C 591 nt3.95□□□□□ -1.78
NPL3Q01560 SMT3YDR510W 306 nt3.95□□□□□ -1.78 RIP-Chip
NPL3Q01560 YER135CYER135C 393 nt3.95□□□□□ -1.78
NPL3Q01560 YGR073CYGR073C 372 nt3.95□□□□□ -1.78
NPL3Q01560 YKL156C-AYKL156C-A 117 nt3.95□□□□□ -1.78
NPL3Q01560 AIM29YKR074W 468 nt3.95□□□□□ -1.78 RIP-Chip
NPL3Q01560 CWC24YLR323C 780 nt3.95□□□□□ -1.78
NPL3Q01560 COX8YLR395C 237 nt3.95□□□□□ -1.78 RIP-Chip
NPL3Q01560 YPL142CYPL142C 318 nt3.95□□□□□ -1.78
NPL3Q01560 RED1YLR263W 2484 nt3.95□□□□□ -1.78
NPL3Q01560 GAL11YOL051W 3246 nt3.95□□□□□ -1.78
NPL3Q01560 OSH2YDL019C 3852 nt3.94□□□□□ -1.78
NPL3Q01560 SSH1YBR283C 1473 nt3.94□□□□□ -1.78
NPL3Q01560 FRQ1YDR373W 573 nt3.94□□□□□ -1.78
NPL3Q01560 EMI1YDR512C 564 nt3.94□□□□□ -1.78
NPL3Q01560 SMB1YER029C 591 nt3.94□□□□□ -1.78
NPL3Q01560 SOL4YGR248W 768 nt3.94□□□□□ -1.78
NPL3Q01560 RPB3YIL021W 957 nt3.94□□□□□ -1.78
NPL3Q01560 YMR031W-AYMR031W-A 327 nt3.94□□□□□ -1.78
NPL3Q01560 HHF1YBR009C 312 nt3.94□□□□□ -1.78
NPL3Q01560 ECM22YLR228C 2445 nt3.94□□□□□ -1.78
NPL3Q01560 YCF1YDR135C 4548 nt3.93□□□□□ -1.78
NPL3Q01560 HSP30YCR021C 999 nt3.93□□□□□ -1.78 RIP-Chip
NPL3Q01560 snR8snR8 190 nt3.93□□□□□ -1.78
NPL3Q01560 YDR526CYDR526C 471 nt3.93□□□□□ -1.78
NPL3Q01560 YKL183C-AYKL183C-A 213 nt3.93□□□□□ -1.78
NPL3Q01560 YNL337WYNL337W 255 nt3.93□□□□□ -1.78
NPL3Q01560 YOR277CYOR277C 309 nt3.93□□□□□ -1.78 RIP-Chip
NPL3Q01560 PIS1YPR113W 663 nt3.93□□□□□ -1.78 RIP-Chip
NPL3Q01560 TAF7YMR227C 1773 nt3.93□□□□□ -1.78
NPL3Q01560 MCD4YKL165C 2760 nt3.93□□□□□ -1.78
NPL3Q01560 KIN4YOR233W 2403 nt3.93□□□□□ -1.78
NPL3Q01560 FRE8YLR047C 2061 nt3.93□□□□□ -1.78
NPL3Q01560 PPZ1YML016C 2079 nt3.93□□□□□ -1.78
NPL3Q01560 GSC2YGR032W 5688 nt3.92□□□□□ -1.78
NPL3Q01560 CWH41YGL027C 2502 nt3.92□□□□□ -1.78
NPL3Q01560 YBR225WYBR225W 2703 nt3.92□□□□□ -1.78
NPL3Q01560 PPQ1YPL179W 1650 nt3.92□□□□□ -1.78
NPL3Q01560 VEL1YGL258W 621 nt3.92□□□□□ -1.78
NPL3Q01560 YHR032C-AYHR032C-A 120 nt3.92□□□□□ -1.78
NPL3Q01560 SPC1YJR010C-A 285 nt3.92□□□□□ -1.78
NPL3Q01560 YLR416CYLR416C 399 nt3.92□□□□□ -1.78
NPL3Q01560 RRT16YNL105W 429 nt3.92□□□□□ -1.78
NPL3Q01560 PDR17YNL264C 1053 nt3.92□□□□□ -1.78
NPL3Q01560 VMA1YDL185W 3216 nt3.92□□□□□ -1.78
NPL3Q01560 USA1YML029W 2517 nt3.91□□□□□ -1.78
NPL3Q01560 AIM11YER093C-A 414 nt3.91□□□□□ -1.78
NPL3Q01560 CDC55YGL190C 1581 nt3.91□□□□□ -1.78
NPL3Q01560 ERV1YGR029W 570 nt3.91□□□□□ -1.78 RIP-Chip
NPL3Q01560 YGR053CYGR053C 852 nt3.91□□□□□ -1.78
NPL3Q01560 ABM1YJR108W 372 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms