Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.4■□□□□ 0.86
CDKL1Q00532 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL1Q00532 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL1Q00532 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL1Q00532 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL1Q00532 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL1Q00532 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.4■□□□□ 0.86
CDKL1Q00532 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL1Q00532 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.39■□□□□ 0.86
CDKL1Q00532 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL1Q00532 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL1Q00532 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL1Q00532 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL1Q00532 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL1Q00532 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL1Q00532 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDKL1Q00532 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CDKL1Q00532 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL1Q00532 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL1Q00532 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL1Q00532 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL1Q00532 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL1Q00532 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL1Q00532 AC008175.2-201ENST00000612840 297 ntBASIC20.39■□□□□ 0.85
CDKL1Q00532 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL1Q00532 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL1Q00532 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL1Q00532 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL1Q00532 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL1Q00532 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL1Q00532 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL1Q00532 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKL1Q00532 AP004607.4-201ENST00000530158 1459 ntBASIC20.38■□□□□ 0.85
CDKL1Q00532 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.38■□□□□ 0.85
CDKL1Q00532 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CDKL1Q00532 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL1Q00532 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKL1Q00532 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.38■□□□□ 0.85
CDKL1Q00532 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.38■□□□□ 0.85
CDKL1Q00532 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL1Q00532 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL1Q00532 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDKL1Q00532 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL1Q00532 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL1Q00532 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL1Q00532 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL1Q00532 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL1Q00532 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.37■□□□□ 0.85
CDKL1Q00532 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.37■□□□□ 0.85
CDKL1Q00532 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDKL1Q00532 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL1Q00532 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.37■□□□□ 0.85
CDKL1Q00532 CCDC92B-201ENST00000575506 885 ntBASIC20.37■□□□□ 0.85
CDKL1Q00532 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.37■□□□□ 0.85
CDKL1Q00532 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDKL1Q00532 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 AC061975.6-201ENST00000579045 1553 ntBASIC20.37■□□□□ 0.85
CDKL1Q00532 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL1Q00532 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.36■□□□□ 0.85
CDKL1Q00532 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL1Q00532 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 AC010141.2-201ENST00000452426 721 ntBASIC20.36■□□□□ 0.85
CDKL1Q00532 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.36■□□□□ 0.85
CDKL1Q00532 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.36■□□□□ 0.85
CDKL1Q00532 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL1Q00532 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL1Q00532 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDKL1Q00532 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL1Q00532 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL1Q00532 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL1Q00532 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL1Q00532 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL1Q00532 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL1Q00532 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDKL1Q00532 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL1Q00532 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDKL1Q00532 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL1Q00532 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms