Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HSPG2P98160 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HSPG2P98160 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HSPG2P98160 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HSPG2P98160 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC13.08□□□□□ -0.32
HSPG2P98160 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC13.08□□□□□ -0.32
HSPG2P98160 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.08□□□□□ -0.32
HSPG2P98160 AL034346.1-201ENST00000568244 1277 ntBASIC13.08□□□□□ -0.32
HSPG2P98160 AC008175.2-201ENST00000612840 297 ntBASIC13.08□□□□□ -0.32
HSPG2P98160 AC010947.1-201ENST00000623454 693 ntBASIC13.08□□□□□ -0.32
HSPG2P98160 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.08□□□□□ -0.32
HSPG2P98160 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.08□□□□□ -0.32
HSPG2P98160 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.08□□□□□ -0.32
HSPG2P98160 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.08□□□□□ -0.32
HSPG2P98160 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.08□□□□□ -0.32
HSPG2P98160 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.08□□□□□ -0.32
HSPG2P98160 AC005363.2-201ENST00000618631 242 ntBASIC13.08□□□□□ -0.32
HSPG2P98160 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.08□□□□□ -0.32
HSPG2P98160 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HSPG2P98160 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HSPG2P98160 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
HSPG2P98160 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.07□□□□□ -0.32
HSPG2P98160 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.07□□□□□ -0.32
HSPG2P98160 REXO1L10P-201ENST00000615707 1290 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 AC105020.6-201ENST00000621523 1217 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HSPG2P98160 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.07□□□□□ -0.32
HSPG2P98160 UPK3BP1-201ENST00000428678 509 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.07□□□□□ -0.32
HSPG2P98160 AC120498.10-201ENST00000621827 505 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.07□□□□□ -0.32
HSPG2P98160 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 DUX4L26-201ENST00000489078 1255 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.07□□□□□ -0.32
HSPG2P98160 AC079089.2-201ENST00000531211 1277 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.07□□□□□ -0.32
HSPG2P98160 AL139125.2-201ENST00000623134 1869 ntBASIC13.07□□□□□ -0.32
HSPG2P98160 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 MED17-227ENST00000640521 2047 ntTSL 5 BASIC13.07□□□□□ -0.32
HSPG2P98160 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HSPG2P98160 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.06□□□□□ -0.32
HSPG2P98160 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HSPG2P98160 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
HSPG2P98160 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.06□□□□□ -0.32
HSPG2P98160 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HSPG2P98160 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HSPG2P98160 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.06□□□□□ -0.32
HSPG2P98160 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.06□□□□□ -0.32
HSPG2P98160 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
HSPG2P98160 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HSPG2P98160 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
HSPG2P98160 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
HSPG2P98160 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.06□□□□□ -0.32
HSPG2P98160 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HSPG2P98160 AC079598.2-202ENST00000546624 1451 ntBASIC13.05□□□□□ -0.32
HSPG2P98160 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.05□□□□□ -0.32
HSPG2P98160 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC13.05□□□□□ -0.32
HSPG2P98160 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HSPG2P98160 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.05□□□□□ -0.32
HSPG2P98160 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.05□□□□□ -0.32
HSPG2P98160 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.05□□□□□ -0.32
HSPG2P98160 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.05□□□□□ -0.32
HSPG2P98160 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.05□□□□□ -0.32
HSPG2P98160 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HSPG2P98160 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms