Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX4P78413 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 AC007322.1-201ENST00000426983 750 ntBASIC21.52■■□□□ 1.04
IRX4P78413 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.52■■□□□ 1.04
IRX4P78413 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.52■■□□□ 1.04
IRX4P78413 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
IRX4P78413 AC005181.1-201ENST00000604782 1256 ntBASIC21.52■■□□□ 1.04
IRX4P78413 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX4P78413 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
IRX4P78413 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
IRX4P78413 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.51■■□□□ 1.03
IRX4P78413 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.51■■□□□ 1.03
IRX4P78413 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.51■■□□□ 1.03
IRX4P78413 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.51■■□□□ 1.03
IRX4P78413 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.51■■□□□ 1.03
IRX4P78413 AC104187.1-201ENST00000607510 612 ntBASIC21.51■■□□□ 1.03
IRX4P78413 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX4P78413 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
IRX4P78413 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.5■■□□□ 1.03
IRX4P78413 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
IRX4P78413 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.5■■□□□ 1.03
IRX4P78413 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.5■■□□□ 1.03
IRX4P78413 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.5■■□□□ 1.03
IRX4P78413 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.5■■□□□ 1.03
IRX4P78413 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.5■■□□□ 1.03
IRX4P78413 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
IRX4P78413 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX4P78413 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
IRX4P78413 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 SLC29A4P1-201ENST00000398760 971 ntBASIC21.49■■□□□ 1.03
IRX4P78413 FAM201B-201ENST00000458407 597 ntBASIC21.49■■□□□ 1.03
IRX4P78413 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.49■■□□□ 1.03
IRX4P78413 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
IRX4P78413 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.49■■□□□ 1.03
IRX4P78413 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.49■■□□□ 1.03
IRX4P78413 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.49■■□□□ 1.03
IRX4P78413 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.49■■□□□ 1.03
IRX4P78413 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.49■■□□□ 1.03
IRX4P78413 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.49■■□□□ 1.03
IRX4P78413 OXCT2P1-201ENST00000447263 1535 ntBASIC21.49■■□□□ 1.03
IRX4P78413 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
IRX4P78413 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
IRX4P78413 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 AC244015.2-201ENST00000616358 1861 ntBASIC21.48■■□□□ 1.03
IRX4P78413 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.48■■□□□ 1.03
IRX4P78413 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
IRX4P78413 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.48■■□□□ 1.03
IRX4P78413 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.48■■□□□ 1.03
IRX4P78413 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.48■■□□□ 1.03
IRX4P78413 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
IRX4P78413 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.48■■□□□ 1.03
IRX4P78413 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
IRX4P78413 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IRX4P78413 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.47■■□□□ 1.03
IRX4P78413 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
IRX4P78413 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.47■■□□□ 1.03
IRX4P78413 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.47■■□□□ 1.03
IRX4P78413 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms