Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LSM6P62312 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
LSM6P62312 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LSM6P62312 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LSM6P62312 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 AC004854.2-201ENST00000608450 1441 ntBASIC18.23■□□□□ 0.51
LSM6P62312 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LSM6P62312 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 AC011484.1-201ENST00000377652 1995 ntBASIC18.23■□□□□ 0.51
LSM6P62312 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 KRT19P1-201ENST00000405746 1186 ntBASIC18.23■□□□□ 0.51
LSM6P62312 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM6P62312 RARRES2P11-201ENST00000635158 484 ntBASIC18.23■□□□□ 0.51
LSM6P62312 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM6P62312 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LSM6P62312 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM6P62312 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LSM6P62312 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
LSM6P62312 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM6P62312 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM6P62312 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSM6P62312 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LSM6P62312 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
LSM6P62312 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LSM6P62312 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM6P62312 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.22■□□□□ 0.51
LSM6P62312 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM6P62312 SLC7A5P1-201ENST00000568957 537 ntBASIC18.22■□□□□ 0.51
LSM6P62312 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM6P62312 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LSM6P62312 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM6P62312 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.21■□□□□ 0.51
LSM6P62312 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LSM6P62312 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 SLC7A5P2-201ENST00000553010 536 ntBASIC18.21■□□□□ 0.51
LSM6P62312 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.21■□□□□ 0.51
LSM6P62312 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.21■□□□□ 0.51
LSM6P62312 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LSM6P62312 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM6P62312 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LSM6P62312 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM6P62312 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.21■□□□□ 0.5
LSM6P62312 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM6P62312 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LSM6P62312 AC097381.1-201ENST00000429019 1296 ntBASIC18.2■□□□□ 0.5
LSM6P62312 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM6P62312 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.2■□□□□ 0.5
LSM6P62312 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LSM6P62312 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms