Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2DP55273 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDKN2DP55273 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2DP55273 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKN2DP55273 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKN2DP55273 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKN2DP55273 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2DP55273 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2DP55273 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKN2DP55273 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDKN2DP55273 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDKN2DP55273 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2DP55273 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKN2DP55273 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 AC092667.1-201ENST00000434301 2586 ntBASIC20.53■□□□□ 0.88
CDKN2DP55273 LINC01521-201ENST00000504184 1943 ntBASIC20.53■□□□□ 0.88
CDKN2DP55273 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.53■□□□□ 0.88
CDKN2DP55273 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 KRT18P14-201ENST00000534205 1250 ntBASIC20.53■□□□□ 0.88
CDKN2DP55273 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKN2DP55273 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.53■□□□□ 0.88
CDKN2DP55273 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKN2DP55273 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKN2DP55273 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN2DP55273 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDKN2DP55273 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKN2DP55273 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKN2DP55273 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN2DP55273 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN2DP55273 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN2DP55273 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN2DP55273 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDKN2DP55273 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDKN2DP55273 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN2DP55273 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKN2DP55273 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKN2DP55273 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CDKN2DP55273 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKN2DP55273 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDKN2DP55273 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDKN2DP55273 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CDKN2DP55273 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDKN2DP55273 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKN2DP55273 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKN2DP55273 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKN2DP55273 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.51■□□□□ 0.87
CDKN2DP55273 SLC7A5P2-201ENST00000553010 536 ntBASIC20.51■□□□□ 0.87
CDKN2DP55273 AP001160.3-201ENST00000601484 763 ntBASIC20.51■□□□□ 0.87
CDKN2DP55273 RARRES2P11-201ENST00000635158 484 ntBASIC20.51■□□□□ 0.87
CDKN2DP55273 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 AC073314.1-201ENST00000568729 2216 ntBASIC20.51■□□□□ 0.87
CDKN2DP55273 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN2DP55273 AC004854.2-201ENST00000608450 1441 ntBASIC20.51■□□□□ 0.87
CDKN2DP55273 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKN2DP55273 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKN2DP55273 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDKN2DP55273 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKN2DP55273 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKN2DP55273 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L2-201ENST00000561772 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKN2DP55273 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKN2DP55273 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L6-201ENST00000626483 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L1-201ENST00000627662 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L8-201ENST00000629013 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L3-201ENST00000630187 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L7-201ENST00000630678 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 DUX4L5-201ENST00000630834 1275 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CDKN2DP55273 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDKN2DP55273 KRT16P2-201ENST00000414673 1423 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 AC011484.1-201ENST00000377652 1995 ntBASIC20.5■□□□□ 0.87
CDKN2DP55273 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDKN2DP55273 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN2DP55273 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms