Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 RPA12YJR063W 378 nt2.2□□□□□ -2.06
SSU72P53538 YKL065W-AYKL065W-A 222 nt2.2□□□□□ -2.06
SSU72P53538 RPL8BYLL045C 771 nt2.2□□□□□ -2.06
SSU72P53538 ILV5YLR355C 1188 nt2.2□□□□□ -2.06
SSU72P53538 FPR1YNL135C 345 nt2.2□□□□□ -2.06
SSU72P53538 VMA9YCL005W-A 222 nt2.2□□□□□ -2.06
SSU72P53538 TVP15YDR100W 432 nt2.19□□□□□ -2.06
SSU72P53538 FMN1YDR236C 657 nt2.19□□□□□ -2.06
SSU72P53538 MAM1YER106W 909 nt2.19□□□□□ -2.06
SSU72P53538 ERG20YJL167W 1059 nt2.19□□□□□ -2.06
SSU72P53538 YML037CYML037C 1023 nt2.19□□□□□ -2.06
SSU72P53538 YMR187CYMR187C 1296 nt2.19□□□□□ -2.06
SSU72P53538 YNL276CYNL276C 396 nt2.19□□□□□ -2.06
SSU72P53538 YNL319WYNL319W 441 nt2.19□□□□□ -2.06
SSU72P53538 TSR4YOL022C 1227 nt2.19□□□□□ -2.06
SSU72P53538 SRL1YOR247W 633 nt2.19□□□□□ -2.06
SSU72P53538 YOR387CYOR387C 621 nt2.19□□□□□ -2.06
SSU72P53538 RGA1YOR127W 3024 nt2.19□□□□□ -2.06
SSU72P53538 KSP1YHR082C 3090 nt2.19□□□□□ -2.06
SSU72P53538 ORC1YML065W 2745 nt2.19□□□□□ -2.06
SSU72P53538 IRA2YOL081W 9240 nt2.18□□□□□ -2.06
SSU72P53538 GIN4YDR507C 3429 nt2.18□□□□□ -2.06
SSU72P53538 CBS2YDR197W 1170 nt2.18□□□□□ -2.06
SSU72P53538 SEC4YFL005W 648 nt2.18□□□□□ -2.06
SSU72P53538 RSR1YGR152C 819 nt2.18□□□□□ -2.06
SSU72P53538 RSM27YGR215W 333 nt2.18□□□□□ -2.06
SSU72P53538 COX6YHR051W 447 nt2.18□□□□□ -2.06
SSU72P53538 UTP30YKR060W 825 nt2.18□□□□□ -2.06
SSU72P53538 NAB3YPL190C 2409 nt2.18□□□□□ -2.06
SSU72P53538 SLP1YOR154W 1764 nt2.18□□□□□ -2.06
SSU72P53538 AGE1YDR524C 1449 nt2.17□□□□□ -2.06
SSU72P53538 RGL1YPL066W 1440 nt2.17□□□□□ -2.06
SSU72P53538 PIG2YIL045W 1617 nt2.17□□□□□ -2.06
SSU72P53538 SDC25YLL016W 3147 nt2.17□□□□□ -2.06
SSU72P53538 RPL13AYDL082W 600 nt2.17□□□□□ -2.06
SSU72P53538 YPD1YDL235C 504 nt2.17□□□□□ -2.06
SSU72P53538 YJL047C-AYJL047C-A 135 nt2.17□□□□□ -2.06
SSU72P53538 YLR307C-AYLR307C-A 264 nt2.17□□□□□ -2.06
SSU72P53538 JIP3YLR331C 378 nt2.17□□□□□ -2.06
SSU72P53538 BTS1YPL069C 1008 nt2.17□□□□□ -2.06
SSU72P53538 ISU1YPL135W 498 nt2.17□□□□□ -2.06
SSU72P53538 YBR085C-AYBR085C-A 258 nt2.17□□□□□ -2.06
SSU72P53538 SAG1YJR004C 1953 nt2.17□□□□□ -2.06
SSU72P53538 YPL150WYPL150W 2706 nt2.17□□□□□ -2.06
SSU72P53538 UTP5YDR398W 1932 nt2.17□□□□□ -2.06
SSU72P53538 YDR179W-AYDR179W-A 1392 nt2.16□□□□□ -2.06
SSU72P53538 YJL049WYJL049W 1353 nt2.16□□□□□ -2.06
SSU72P53538 HTB1YDR224C 396 nt2.16□□□□□ -2.06
SSU72P53538 YFH7YFR007W 1062 nt2.16□□□□□ -2.06
SSU72P53538 YJL169WYJL169W 369 nt2.16□□□□□ -2.06
SSU72P53538 GPX1YKL026C 504 nt2.16□□□□□ -2.06
SSU72P53538 COX14YML129C 213 nt2.16□□□□□ -2.06
SSU72P53538 HSC82YMR186W 2118 nt2.16□□□□□ -2.06
SSU72P53538 YMR320WYMR320W 306 nt2.16□□□□□ -2.06
SSU72P53538 IPP1YBR011C 864 nt2.16□□□□□ -2.06
SSU72P53538 MBA1YBR185C 837 nt2.16□□□□□ -2.06
SSU72P53538 POL4YCR014C 1749 nt2.16□□□□□ -2.06
SSU72P53538 UTP15YMR093W 1542 nt2.16□□□□□ -2.06
SSU72P53538 URB2YJR041C 3525 nt2.16□□□□□ -2.06
SSU72P53538 YNL193WYNL193W 1677 nt2.15□□□□□ -2.06
SSU72P53538 YBP2YGL060W 1926 nt2.15□□□□□ -2.06
SSU72P53538 PEX5YDR244W 1839 nt2.15□□□□□ -2.06
SSU72P53538 ATC1YDR184C 885 nt2.15□□□□□ -2.07
SSU72P53538 RPL6BYLR448W 531 nt2.15□□□□□ -2.07
SSU72P53538 RPL23AYBL087C 414 nt2.15□□□□□ -2.07
SSU72P53538 RPS12YOR369C 432 nt2.15□□□□□ -2.07
SSU72P53538 RFC5YBR087W 1065 nt2.15□□□□□ -2.07
SSU72P53538 AIM4YBR194W 372 nt2.15□□□□□ -2.07
SSU72P53538 TRM82YDR165W 1335 nt2.15□□□□□ -2.07
SSU72P53538 YDR170W-AYDR170W-A 1323 nt2.15□□□□□ -2.07
SSU72P53538 YBL005W-AYBL005W-A 1323 nt2.15□□□□□ -2.07
SSU72P53538 YMR046CYMR046C 1323 nt2.15□□□□□ -2.07
SSU72P53538 YNL284C-AYNL284C-A 1323 nt2.15□□□□□ -2.07
SSU72P53538 ESA1YOR244W 1338 nt2.15□□□□□ -2.07
SSU72P53538 MDM36YPR083W 1740 nt2.14□□□□□ -2.07
SSU72P53538 SYO1YDL063C 1863 nt2.14□□□□□ -2.07
SSU72P53538 UBX3YDL091C 1368 nt2.14□□□□□ -2.07
SSU72P53538 DIG2YDR480W 972 nt2.14□□□□□ -2.07
SSU72P53538 YIP5YGL161C 933 nt2.14□□□□□ -2.07
SSU72P53538 YHL048C-AYHL048C-A 135 nt2.14□□□□□ -2.07
SSU72P53538 CTK2YJL006C 972 nt2.14□□□□□ -2.07
SSU72P53538 YJL114WYJL114W 681 nt2.14□□□□□ -2.07
SSU72P53538 SUI2YJR007W 915 nt2.14□□□□□ -2.07
SSU72P53538 SFT1YKL006C-A 294 nt2.14□□□□□ -2.07
SSU72P53538 YKL033W-AYKL033W-A 711 nt2.14□□□□□ -2.07
SSU72P53538 RPS30AYLR287C-A 192 nt2.14□□□□□ -2.07
SSU72P53538 FAR3YMR052W 615 nt2.14□□□□□ -2.07
SSU72P53538 KAR4YCL055W 1008 nt2.14□□□□□ -2.07
SSU72P53538 STH1YIL126W 4080 nt2.13□□□□□ -2.07
SSU72P53538 FKS3YMR306W 5358 nt2.13□□□□□ -2.07
SSU72P53538 ATP16YDL004W 483 nt2.13□□□□□ -2.07
SSU72P53538 NRG1YDR043C 696 nt2.13□□□□□ -2.07
SSU72P53538 YDR193WYDR193W 399 nt2.13□□□□□ -2.07
SSU72P53538 CWC23YGL128C 852 nt2.13□□□□□ -2.07
SSU72P53538 YHL002C-AYHL002C-A 489 nt2.13□□□□□ -2.07
SSU72P53538 YJL032WYJL032W 315 nt2.13□□□□□ -2.07
SSU72P53538 PAU8YAL068C 363 nt2.13□□□□□ -2.07
SSU72P53538 UBC12YLR306W 567 nt2.13□□□□□ -2.07
SSU72P53538 ADI1YMR009W 540 nt2.13□□□□□ -2.07
SSU72P53538 AIM36YMR157C 768 nt2.13□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms