Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 DUX4L2-201ENST00000561772 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
CLCN2P51788 GABARAPL3-202ENST00000624044 1851 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4L6-201ENST00000626483 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4L1-201ENST00000627662 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4L8-201ENST00000629013 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4L3-201ENST00000630187 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4L7-201ENST00000630678 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 DUX4L5-201ENST00000630834 1275 ntBASIC20.06■□□□□ 0.8
CLCN2P51788 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCN2P51788 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN2P51788 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN2P51788 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCN2P51788 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN2P51788 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN2P51788 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCN2P51788 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.05■□□□□ 0.8
CLCN2P51788 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLCN2P51788 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCN2P51788 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCN2P51788 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN2P51788 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN2P51788 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN2P51788 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCN2P51788 BX323043.1-201ENST00000641006 1765 ntBASIC20.05■□□□□ 0.8
CLCN2P51788 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN2P51788 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN2P51788 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN2P51788 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN2P51788 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN2P51788 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCN2P51788 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN2P51788 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN2P51788 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN2P51788 AC009237.3-201ENST00000393279 1427 ntBASIC20.04■□□□□ 0.8
CLCN2P51788 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN2P51788 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN2P51788 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.04■□□□□ 0.8
CLCN2P51788 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN2P51788 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN2P51788 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN2P51788 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CLCN2P51788 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN2P51788 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCN2P51788 AC104564.3-201ENST00000582367 638 ntBASIC20.03■□□□□ 0.8
CLCN2P51788 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN2P51788 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN2P51788 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLCN2P51788 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN2P51788 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCN2P51788 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CLCN2P51788 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CLCN2P51788 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLCN2P51788 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
CLCN2P51788 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLCN2P51788 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCN2P51788 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCN2P51788 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLCN2P51788 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCN2P51788 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN2P51788 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLCN2P51788 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLCN2P51788 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN2P51788 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN2P51788 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN2P51788 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN2P51788 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.79
CLCN2P51788 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms