Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CX3CR1P49238 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CX3CR1P49238 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CX3CR1P49238 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CX3CR1P49238 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CX3CR1P49238 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.23■□□□□ 0.51
CX3CR1P49238 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CX3CR1P49238 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CX3CR1P49238 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CX3CR1P49238 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CX3CR1P49238 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CX3CR1P49238 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.22■□□□□ 0.51
CX3CR1P49238 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CX3CR1P49238 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CX3CR1P49238 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 AC079140.4-201ENST00000507448 529 ntBASIC18.22■□□□□ 0.51
CX3CR1P49238 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CX3CR1P49238 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.22■□□□□ 0.51
CX3CR1P49238 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.22■□□□□ 0.51
CX3CR1P49238 AC092667.1-201ENST00000434301 2586 ntBASIC18.22■□□□□ 0.51
CX3CR1P49238 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.22■□□□□ 0.51
CX3CR1P49238 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CX3CR1P49238 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CX3CR1P49238 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CX3CR1P49238 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CX3CR1P49238 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CX3CR1P49238 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.2■□□□□ 0.5
CX3CR1P49238 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CX3CR1P49238 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.2■□□□□ 0.5
CX3CR1P49238 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.2■□□□□ 0.5
CX3CR1P49238 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CX3CR1P49238 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.2■□□□□ 0.5
CX3CR1P49238 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CX3CR1P49238 KRT87P-202ENST00000534226 1464 ntBASIC18.2■□□□□ 0.5
CX3CR1P49238 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.2■□□□□ 0.5
CX3CR1P49238 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CX3CR1P49238 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 AC006128.1-201ENST00000624704 1661 ntBASIC18.19■□□□□ 0.5
CX3CR1P49238 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.19■□□□□ 0.5
CX3CR1P49238 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CX3CR1P49238 MIR638-201ENST00000385237 100 ntBASIC18.19■□□□□ 0.5
CX3CR1P49238 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 AL157384.1-201ENST00000445995 2473 ntBASIC18.19■□□□□ 0.5
CX3CR1P49238 AC061975.6-201ENST00000579045 1553 ntBASIC18.19■□□□□ 0.5
CX3CR1P49238 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CX3CR1P49238 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.19■□□□□ 0.5
CX3CR1P49238 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CX3CR1P49238 PLK5-205ENST00000642079 1969 ntBASIC18.19■□□□□ 0.5
CX3CR1P49238 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.19■□□□□ 0.5
CX3CR1P49238 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.18■□□□□ 0.5
CX3CR1P49238 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CX3CR1P49238 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 AC027612.3-201ENST00000413684 1047 ntBASIC18.18■□□□□ 0.5
CX3CR1P49238 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.18■□□□□ 0.5
CX3CR1P49238 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms