Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YJL181WYJL181W 1836 nt1.87□□□□□ -2.11
CUP9P41817 YRB1YDR002W 606 nt1.87□□□□□ -2.11
CUP9P41817 STE2YFL026W 1296 nt1.87□□□□□ -2.11
CUP9P41817 YAL042C-AYAL042C-A 378 nt1.87□□□□□ -2.11
CUP9P41817 YKL162CYKL162C 1209 nt1.87□□□□□ -2.11
CUP9P41817 PML39YML107C 1005 nt1.87□□□□□ -2.11
CUP9P41817 YOL159C-AYOL159C-A 273 nt1.87□□□□□ -2.11
CUP9P41817 HAT1YPL001W 1125 nt1.87□□□□□ -2.11
CUP9P41817 SPP381YBR152W 876 nt1.87□□□□□ -2.11
CUP9P41817 FAB1YFR019W 6837 nt1.87□□□□□ -2.11
CUP9P41817 GCV2YMR189W 3105 nt1.86□□□□□ -2.11
CUP9P41817 TPS2YDR074W 2691 nt1.86□□□□□ -2.11
CUP9P41817 ANR2YKL047W 1551 nt1.86□□□□□ -2.11
CUP9P41817 AGE1YDR524C 1449 nt1.86□□□□□ -2.11
CUP9P41817 YFH1YDL120W 525 nt1.86□□□□□ -2.11
CUP9P41817 YIR036W-AYIR036W-A 402 nt1.86□□□□□ -2.11
CUP9P41817 SFT1YKL006C-A 294 nt1.86□□□□□ -2.11
CUP9P41817 SRT1YMR101C 1032 nt1.86□□□□□ -2.11
CUP9P41817 ECM13YBL043W 774 nt1.86□□□□□ -2.11
CUP9P41817 SIP18YMR175W 240 nt1.86□□□□□ -2.11
CUP9P41817 EAF7YNL136W 1278 nt1.86□□□□□ -2.11
CUP9P41817 DUG3YNL191W 1074 nt1.86□□□□□ -2.11
CUP9P41817 YOL166CYOL166C 339 nt1.86□□□□□ -2.11
CUP9P41817 YOR114WYOR114W 885 nt1.86□□□□□ -2.11
CUP9P41817 YPL071CYPL071C 471 nt1.86□□□□□ -2.11
CUP9P41817 MGM1YOR211C 2646 nt1.86□□□□□ -2.11
CUP9P41817 YRR1YOR162C 2433 nt1.85□□□□□ -2.11
CUP9P41817 YDL241WYDL241W 372 nt1.85□□□□□ -2.11
CUP9P41817 RPL27BYDR471W 411 nt1.85□□□□□ -2.11
CUP9P41817 YIL068W-AYIL068W-A 384 nt1.85□□□□□ -2.11
CUP9P41817 PET191YJR034W 327 nt1.85□□□□□ -2.11
CUP9P41817 NNF1YJR112W 606 nt1.85□□□□□ -2.11
CUP9P41817 LIP2YLR239C 987 nt1.85□□□□□ -2.11
CUP9P41817 TSR4YOL022C 1227 nt1.85□□□□□ -2.11
CUP9P41817 LDH1YBR204C 1128 nt1.85□□□□□ -2.11
CUP9P41817 MUB1YMR100W 1863 nt1.85□□□□□ -2.11
CUP9P41817 YKL075CYKL075C 1353 nt1.85□□□□□ -2.11
CUP9P41817 SDC25YLL016W 3147 nt1.84□□□□□ -2.11
CUP9P41817 SST2YLR452C 2097 nt1.84□□□□□ -2.11
CUP9P41817 AI3Q0060 1248 nt1.84□□□□□ -2.11
CUP9P41817 MFA1YDR461W 111 nt1.84□□□□□ -2.11
CUP9P41817 TIM9YEL020W-A 264 nt1.84□□□□□ -2.11
CUP9P41817 YER172C-AYER172C-A 381 nt1.84□□□□□ -2.11
CUP9P41817 NOP19YGR251W 591 nt1.84□□□□□ -2.11
CUP9P41817 YHL045WYHL045W 348 nt1.84□□□□□ -2.11
CUP9P41817 DSE2YHR143W 978 nt1.84□□□□□ -2.11
CUP9P41817 AIM19YIL087C 474 nt1.84□□□□□ -2.11
CUP9P41817 YLL044WYLL044W 447 nt1.84□□□□□ -2.11
CUP9P41817 LCL2YLR104W 396 nt1.84□□□□□ -2.11
CUP9P41817 CTP1YBR291C 900 nt1.84□□□□□ -2.11
CUP9P41817 RRP7YCL031C 894 nt1.84□□□□□ -2.11
CUP9P41817 AMS1YGL156W 3252 nt1.84□□□□□ -2.12
CUP9P41817 AI4Q0065 1671 nt1.83□□□□□ -2.12
CUP9P41817 GPI8YDR331W 1236 nt1.83□□□□□ -2.12
CUP9P41817 KEG1YFR042W 603 nt1.83□□□□□ -2.12
CUP9P41817 COG2YGR120C 789 nt1.83□□□□□ -2.12
CUP9P41817 RPL6BYLR448W 531 nt1.83□□□□□ -2.12
CUP9P41817 SPO20YMR017W 1194 nt1.83□□□□□ -2.12
CUP9P41817 YMR178WYMR178W 825 nt1.83□□□□□ -2.12
CUP9P41817 RPS10BYMR230W 318 nt1.83□□□□□ -2.12
CUP9P41817 YNL046WYNL046W 519 nt1.83□□□□□ -2.12
CUP9P41817 DGR1YNL130C-A 147 nt1.83□□□□□ -2.12
CUP9P41817 YOR097CYOR097C 528 nt1.83□□□□□ -2.12
CUP9P41817 GCY1YOR120W 939 nt1.83□□□□□ -2.12
CUP9P41817 MF(ALPHA)1YPL187W 498 nt1.83□□□□□ -2.12
CUP9P41817 RGA1YOR127W 3024 nt1.83□□□□□ -2.12
CUP9P41817 TFB1YDR311W 1929 nt1.83□□□□□ -2.12
CUP9P41817 SPP41YDR464W 4308 nt1.82□□□□□ -2.12
CUP9P41817 SIP3YNL257C 3690 nt1.82□□□□□ -2.12
CUP9P41817 SIR4YDR227W 4077 nt1.82□□□□□ -2.12
CUP9P41817 KSP1YHR082C 3090 nt1.82□□□□□ -2.12
CUP9P41817 EMI1YDR512C 564 nt1.82□□□□□ -2.12
CUP9P41817 YGL258W-AYGL258W-A 234 nt1.82□□□□□ -2.12
CUP9P41817 YGR050CYGR050C 357 nt1.82□□□□□ -2.12
CUP9P41817 YIL046W-AYIL046W-A 165 nt1.82□□□□□ -2.12
CUP9P41817 AIM36YMR157C 768 nt1.82□□□□□ -2.12
CUP9P41817 YNL276CYNL276C 396 nt1.82□□□□□ -2.12
CUP9P41817 MBA1YBR185C 837 nt1.82□□□□□ -2.12
CUP9P41817 UBX3YDL091C 1368 nt1.82□□□□□ -2.12
CUP9P41817 YLR108CYLR108C 1458 nt1.82□□□□□ -2.12
CUP9P41817 BIT61YJL058C 1632 nt1.81□□□□□ -2.12
CUP9P41817 HSC82YMR186W 2118 nt1.81□□□□□ -2.12
CUP9P41817 SAE2YGL175C 1038 nt1.81□□□□□ -2.12
CUP9P41817 YHL044WYHL044W 708 nt1.81□□□□□ -2.12
CUP9P41817 RUF20RUF20 443 nt1.81□□□□□ -2.12
CUP9P41817 snR34snR34 203 nt1.81□□□□□ -2.12
CUP9P41817 snR35snR35 204 nt1.81□□□□□ -2.12
CUP9P41817 SCY1YGL083W 2415 nt1.81□□□□□ -2.12
CUP9P41817 TAE2YPL009C 3117 nt1.81□□□□□ -2.12
CUP9P41817 ERT1YBR239C 1590 nt1.81□□□□□ -2.12
CUP9P41817 YOR093CYOR093C 4947 nt1.8□□□□□ -2.12
CUP9P41817 UFD4YKL010C 4452 nt1.8□□□□□ -2.12
CUP9P41817 MCD1YDL003W 1701 nt1.8□□□□□ -2.12
CUP9P41817 NOP14YDL148C 2433 nt1.8□□□□□ -2.12
CUP9P41817 GIS1YDR096W 2685 nt1.8□□□□□ -2.12
CUP9P41817 AFI1YOR129C 2682 nt1.8□□□□□ -2.12
CUP9P41817 DIG2YDR480W 972 nt1.8□□□□□ -2.12
CUP9P41817 YOR020W-AYOR020W-A 273 nt1.8□□□□□ -2.12
CUP9P41817 NOP56YLR197W 1515 nt1.8□□□□□ -2.12
CUP9P41817 YHR214C-BYHR214C-B 5382 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms