Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 PEX27YOR193W 1131 nt2.36□□□□□ -2.03
CDC40P40968 APA1YCL050C 966 nt2.36□□□□□ -2.03
CDC40P40968 YLR446WYLR446W 1302 nt2.36□□□□□ -2.03
CDC40P40968 SLK19YOR195W 2466 nt2.35□□□□□ -2.03
CDC40P40968 SIP3YNL257C 3690 nt2.35□□□□□ -2.03
CDC40P40968 YDR381C-AYDR381C-A 345 nt2.35□□□□□ -2.03
CDC40P40968 SYS1YJL004C 612 nt2.35□□□□□ -2.03
CDC40P40968 TDA8YAL064C-A 381 nt2.35□□□□□ -2.03
CDC40P40968 SMD3YLR147C 306 nt2.35□□□□□ -2.03
CDC40P40968 RPS30AYLR287C-A 192 nt2.35□□□□□ -2.03
CDC40P40968 YMR122W-AYMR122W-A 255 nt2.35□□□□□ -2.03
CDC40P40968 MSN1YOL116W 1149 nt2.35□□□□□ -2.03
CDC40P40968 snR24snR24 89 nt2.35□□□□□ -2.03
CDC40P40968 PUF4YGL014W 2667 nt2.35□□□□□ -2.03
CDC40P40968 HFD1YMR110C 1599 nt2.35□□□□□ -2.03
CDC40P40968 YDR338CYDR338C 2088 nt2.35□□□□□ -2.03
CDC40P40968 MDM1YML104C 3384 nt2.35□□□□□ -2.03
CDC40P40968 PHO2YDL106C 1680 nt2.34□□□□□ -2.03
CDC40P40968 TMA64YDR117C 1698 nt2.34□□□□□ -2.03
CDC40P40968 NFT1YKR103W 3657 nt2.34□□□□□ -2.03
CDC40P40968 POM152YMR129W 4014 nt2.34□□□□□ -2.03
CDC40P40968 SRB7YDR308C 423 nt2.34□□□□□ -2.03
CDC40P40968 YGR050CYGR050C 357 nt2.34□□□□□ -2.03
CDC40P40968 RFA3YJL173C 369 nt2.34□□□□□ -2.03
CDC40P40968 RPS29AYLR388W 171 nt2.34□□□□□ -2.03
CDC40P40968 RCE1YMR274C 948 nt2.34□□□□□ -2.03
CDC40P40968 YNR034W-AYNR034W-A 297 nt2.34□□□□□ -2.03
CDC40P40968 ARO4YBR249C 1113 nt2.34□□□□□ -2.03
CDC40P40968 HOS4YIL112W 3252 nt2.34□□□□□ -2.04
CDC40P40968 BFR1YOR198C 1413 nt2.34□□□□□ -2.04
CDC40P40968 RLF2YPR018W 1821 nt2.33□□□□□ -2.04
CDC40P40968 FAR11YNL127W 2862 nt2.33□□□□□ -2.04
CDC40P40968 ECM29YHL030W 5607 nt2.33□□□□□ -2.04
CDC40P40968 SUL1YBR294W 2580 nt2.33□□□□□ -2.04
CDC40P40968 YCT1YLL055W 1596 nt2.33□□□□□ -2.04
CDC40P40968 snR76snR76 109 nt2.33□□□□□ -2.04
CDC40P40968 YMR31YFR049W 372 nt2.33□□□□□ -2.04
CDC40P40968 YIP5YGL161C 933 nt2.33□□□□□ -2.04
CDC40P40968 RPL11BYGR085C 525 nt2.33□□□□□ -2.04
CDC40P40968 NEJ1YLR265C 1029 nt2.33□□□□□ -2.04
CDC40P40968 SPR2YOR214C 711 nt2.33□□□□□ -2.04
CDC40P40968 MGE1YOR232W 687 nt2.33□□□□□ -2.04
CDC40P40968 RPL11AYPR102C 525 nt2.33□□□□□ -2.04
CDC40P40968 RRP15YPR143W 753 nt2.33□□□□□ -2.04
CDC40P40968 SEC66YBR171W 621 nt2.33□□□□□ -2.04
CDC40P40968 YEF3YLR249W 3135 nt2.33□□□□□ -2.04
CDC40P40968 SGM1YJR134C 2124 nt2.33□□□□□ -2.04
CDC40P40968 YKL222CYKL222C 2118 nt2.33□□□□□ -2.04
CDC40P40968 YNL018CYNL018C 1839 nt2.33□□□□□ -2.04
CDC40P40968 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
CDC40P40968 ESC1YMR219W 4977 nt2.32□□□□□ -2.04
CDC40P40968 YCR045W-AYCR045W-A 351 nt2.32□□□□□ -2.04
CDC40P40968 SLU7YDR088C 1149 nt2.32□□□□□ -2.04
CDC40P40968 YDR262WYDR262W 819 nt2.32□□□□□ -2.04
CDC40P40968 PAU10YDR542W 363 nt2.32□□□□□ -2.04
CDC40P40968 HYP2YEL034W 474 nt2.32□□□□□ -2.04
CDC40P40968 PAU11YGL261C 363 nt2.32□□□□□ -2.04
CDC40P40968 BTN2YGR142W 1233 nt2.32□□□□□ -2.04
CDC40P40968 TPK3YKL166C 1197 nt2.32□□□□□ -2.04
CDC40P40968 MST28YAR033W 705 nt2.32□□□□□ -2.04
CDC40P40968 ECI1YLR284C 843 nt2.32□□□□□ -2.04
CDC40P40968 YLR365WYLR365W 333 nt2.32□□□□□ -2.04
CDC40P40968 PAU4YLR461W 363 nt2.32□□□□□ -2.04
CDC40P40968 YRO2YBR054W 1035 nt2.32□□□□□ -2.04
CDC40P40968 PIS1YPR113W 663 nt2.32□□□□□ -2.04
CDC40P40968 ISW1YBR245C 3390 nt2.32□□□□□ -2.04
CDC40P40968 NPR1YNL183C 2373 nt2.31□□□□□ -2.04
CDC40P40968 SAK1YER129W 3429 nt2.31□□□□□ -2.04
CDC40P40968 TPS2YDR074W 2691 nt2.31□□□□□ -2.04
CDC40P40968 CBS2YDR197W 1170 nt2.31□□□□□ -2.04
CDC40P40968 RMD6YEL072W 696 nt2.31□□□□□ -2.04
CDC40P40968 YER091C-AYER091C-A 222 nt2.31□□□□□ -2.04
CDC40P40968 RPL36AYMR194W 303 nt2.31□□□□□ -2.04
CDC40P40968 CRS5YOR031W 210 nt2.31□□□□□ -2.04
CDC40P40968 NIP7YPL211W 546 nt2.31□□□□□ -2.04
CDC40P40968 UTP5YDR398W 1932 nt2.3□□□□□ -2.04
CDC40P40968 BPT1YLL015W 4680 nt2.3□□□□□ -2.04
CDC40P40968 YDR090CYDR090C 933 nt2.3□□□□□ -2.04
CDC40P40968 HTB1YDR224C 396 nt2.3□□□□□ -2.04
CDC40P40968 PIB1YDR313C 861 nt2.3□□□□□ -2.04
CDC40P40968 FMP32YFL046W 624 nt2.3□□□□□ -2.04
CDC40P40968 COX6YHR051W 447 nt2.3□□□□□ -2.04
CDC40P40968 IKI1YHR187W 930 nt2.3□□□□□ -2.04
CDC40P40968 YKR070WYKR070W 1059 nt2.3□□□□□ -2.04
CDC40P40968 YOL019W-AYOL019W-A 153 nt2.3□□□□□ -2.04
CDC40P40968 SGT1YOR057W 1188 nt2.3□□□□□ -2.04
CDC40P40968 IRA2YOL081W 9240 nt2.29□□□□□ -2.04
CDC40P40968 BAS1YKR099W 2436 nt2.29□□□□□ -2.04
CDC40P40968 SSP1YHR184W 1716 nt2.29□□□□□ -2.04
CDC40P40968 PCK1YKR097W 1650 nt2.29□□□□□ -2.04
CDC40P40968 YCR090CYCR090C 549 nt2.29□□□□□ -2.04
CDC40P40968 RAV2YDR202C 1056 nt2.29□□□□□ -2.04
CDC40P40968 YER189WYER189W 369 nt2.29□□□□□ -2.04
CDC40P40968 YLL044WYLL044W 447 nt2.29□□□□□ -2.04
CDC40P40968 YMR320WYMR320W 306 nt2.29□□□□□ -2.04
CDC40P40968 CUR1YPR158W 759 nt2.29□□□□□ -2.04
CDC40P40968 snR42snR42 351 nt2.29□□□□□ -2.04
CDC40P40968 ROG1YGL144C 2058 nt2.29□□□□□ -2.04
CDC40P40968 HEH2YDR458C 1992 nt2.29□□□□□ -2.04
CDC40P40968 SDC25YLL016W 3147 nt2.28□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms