Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 TRA1YHR099W 11235 nt2.42□□□□□ -2.02
TDA11P38854 YPL150WYPL150W 2706 nt2.42□□□□□ -2.02
TDA11P38854 BUB1YGR188C 3066 nt2.42□□□□□ -2.02
TDA11P38854 TMA64YDR117C 1698 nt2.42□□□□□ -2.02
TDA11P38854 YHR078WYHR078W 1659 nt2.42□□□□□ -2.02
TDA11P38854 PRE1YER012W 597 nt2.42□□□□□ -2.02
TDA11P38854 ERG28YER044C 447 nt2.42□□□□□ -2.02
TDA11P38854 YIL141WYIL141W 390 nt2.42□□□□□ -2.02
TDA11P38854 YJR020WYJR020W 333 nt2.42□□□□□ -2.02
TDA11P38854 YLR169WYLR169W 354 nt2.42□□□□□ -2.02
TDA11P38854 TMA10YLR327C 261 nt2.42□□□□□ -2.02
TDA11P38854 YBL108WYBL108W 306 nt2.42□□□□□ -2.02
TDA11P38854 YOR366WYOR366W 354 nt2.42□□□□□ -2.02
TDA11P38854 YBP2YGL060W 1926 nt2.41□□□□□ -2.02
TDA11P38854 FKS3YMR306W 5358 nt2.41□□□□□ -2.02
TDA11P38854 RPL22BYFL034C-A 369 nt2.41□□□□□ -2.02
TDA11P38854 YGR270C-AYGR270C-A 219 nt2.41□□□□□ -2.02
TDA11P38854 YKL115CYKL115C 393 nt2.41□□□□□ -2.02
TDA11P38854 MRPL33YMR286W 261 nt2.41□□□□□ -2.02
TDA11P38854 RPL36BYPL249C-A 303 nt2.41□□□□□ -2.02
TDA11P38854 ACM1YPL267W 630 nt2.41□□□□□ -2.02
TDA11P38854 PIG2YIL045W 1617 nt2.41□□□□□ -2.02
TDA11P38854 ESA1YOR244W 1338 nt2.41□□□□□ -2.02
TDA11P38854 TFB1YDR311W 1929 nt2.4□□□□□ -2.02
TDA11P38854 FIR1YER032W 2631 nt2.4□□□□□ -2.02
TDA11P38854 DNF1YER166W 4716 nt2.4□□□□□ -2.02
TDA11P38854 SSN2YDR443C 4263 nt2.4□□□□□ -2.02
TDA11P38854 MAK5YBR142W 2322 nt2.4□□□□□ -2.02
TDA11P38854 NEW1YPL226W 3591 nt2.4□□□□□ -2.03
TDA11P38854 YHR213WYHR213W 597 nt2.4□□□□□ -2.03
TDA11P38854 YIR018C-AYIR018C-A 138 nt2.4□□□□□ -2.03
TDA11P38854 RPL17BYJL177W 555 nt2.4□□□□□ -2.03
TDA11P38854 YAR062WYAR062W 597 nt2.4□□□□□ -2.03
TDA11P38854 YIP3YNL044W 531 nt2.4□□□□□ -2.03
TDA11P38854 MER1YNL210W 813 nt2.4□□□□□ -2.03
TDA11P38854 YOR283WYOR283W 693 nt2.4□□□□□ -2.03
TDA11P38854 snR24snR24 89 nt2.4□□□□□ -2.03
TDA11P38854 VMA9YCL005W-A 222 nt2.4□□□□□ -2.03
TDA11P38854 ARP5YNL059C 2268 nt2.4□□□□□ -2.03
TDA11P38854 ATP22YDR350C 2055 nt2.4□□□□□ -2.03
TDA11P38854 HOP1YIL072W 1818 nt2.4□□□□□ -2.03
TDA11P38854 YJL181WYJL181W 1836 nt2.4□□□□□ -2.03
TDA11P38854 PDR1YGL013C 3207 nt2.39□□□□□ -2.03
TDA11P38854 VPS13YLL040C 9435 nt2.39□□□□□ -2.03
TDA11P38854 STE11YLR362W 2154 nt2.39□□□□□ -2.03
TDA11P38854 APC11YDL008W 498 nt2.39□□□□□ -2.03
TDA11P38854 RSR1YGR152C 819 nt2.39□□□□□ -2.03
TDA11P38854 SFT1YKL006C-A 294 nt2.39□□□□□ -2.03
TDA11P38854 ERV41YML067C 1059 nt2.39□□□□□ -2.03
TDA11P38854 DYN3YMR299C 939 nt2.39□□□□□ -2.03
TDA11P38854 YBR090CYBR090C 369 nt2.39□□□□□ -2.03
TDA11P38854 ERT1YBR239C 1590 nt2.39□□□□□ -2.03
TDA11P38854 YOL098CYOL098C 3114 nt2.39□□□□□ -2.03
TDA11P38854 SPT14YPL175W 1359 nt2.38□□□□□ -2.03
TDA11P38854 PSD2YGR170W 3417 nt2.38□□□□□ -2.03
TDA11P38854 NPR3YHL023C 3441 nt2.38□□□□□ -2.03
TDA11P38854 YJL132WYJL132W 2253 nt2.38□□□□□ -2.03
TDA11P38854 SHR3YDL212W 633 nt2.38□□□□□ -2.03
TDA11P38854 RUB1YDR139C 234 nt2.38□□□□□ -2.03
TDA11P38854 YDR186CYDR186C 2634 nt2.38□□□□□ -2.03
TDA11P38854 RPN9YDR427W 1182 nt2.38□□□□□ -2.03
TDA11P38854 YGL242CYGL242C 546 nt2.38□□□□□ -2.03
TDA11P38854 MVB12YGR206W 306 nt2.38□□□□□ -2.03
TDA11P38854 LSM12YHR121W 564 nt2.38□□□□□ -2.03
TDA11P38854 CMC1YKL137W 336 nt2.38□□□□□ -2.03
TDA11P38854 YOL162WYOL162W 648 nt2.38□□□□□ -2.03
TDA11P38854 RPC40YPR110C 1008 nt2.38□□□□□ -2.03
TDA11P38854 APA1YCL050C 966 nt2.38□□□□□ -2.03
TDA11P38854 VHR1YIL056W 1923 nt2.38□□□□□ -2.03
TDA11P38854 KAR1YNL188W 1302 nt2.38□□□□□ -2.03
TDA11P38854 IRC8YJL051W 2469 nt2.37□□□□□ -2.03
TDA11P38854 MRPL32YCR003W 552 nt2.37□□□□□ -2.03
TDA11P38854 ERG25YGR060W 930 nt2.37□□□□□ -2.03
TDA11P38854 YIL012WYIL012W 342 nt2.37□□□□□ -2.03
TDA11P38854 YAP5YIR018W 738 nt2.37□□□□□ -2.03
TDA11P38854 YPR014CYPR014C 330 nt2.37□□□□□ -2.03
TDA11P38854 NTC20YBR188C 423 nt2.37□□□□□ -2.03
TDA11P38854 snR43snR43 209 nt2.37□□□□□ -2.03
TDA11P38854 IRA2YOL081W 9240 nt2.37□□□□□ -2.03
TDA11P38854 IKI3YLR384C 4050 nt2.37□□□□□ -2.03
TDA11P38854 ISW1YBR245C 3390 nt2.36□□□□□ -2.03
TDA11P38854 MAK11YKL021C 1407 nt2.36□□□□□ -2.03
TDA11P38854 BIT61YJL058C 1632 nt2.36□□□□□ -2.03
TDA11P38854 DUG2YBR281C 2637 nt2.36□□□□□ -2.03
TDA11P38854 RGA2YDR379W 3030 nt2.36□□□□□ -2.03
TDA11P38854 NOP19YGR251W 591 nt2.36□□□□□ -2.03
TDA11P38854 YAL042C-AYAL042C-A 378 nt2.36□□□□□ -2.03
TDA11P38854 YLR257WYLR257W 966 nt2.36□□□□□ -2.03
TDA11P38854 YMR181CYMR181C 465 nt2.36□□□□□ -2.03
TDA11P38854 YOL038C-AYOL038C-A 96 nt2.36□□□□□ -2.03
TDA11P38854 NGL1YOL042W 1092 nt2.36□□□□□ -2.03
TDA11P38854 KAR4YCL055W 1008 nt2.36□□□□□ -2.03
TDA11P38854 BRE5YNR051C 1548 nt2.36□□□□□ -2.03
TDA11P38854 SAK1YER129W 3429 nt2.36□□□□□ -2.03
TDA11P38854 RPN3YER021W 1572 nt2.36□□□□□ -2.03
TDA11P38854 TOF1YNL273W 3717 nt2.35□□□□□ -2.03
TDA11P38854 YER046W-AYER046W-A 330 nt2.35□□□□□ -2.03
TDA11P38854 PEA2YER149C 1263 nt2.35□□□□□ -2.03
TDA11P38854 GEP7YGL057C 864 nt2.35□□□□□ -2.03
TDA11P38854 YKE2YLR200W 345 nt2.35□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms