Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC009102.2-201ENST00000606772 1639 ntBASIC20.87■□□□□ 0.93
LSP1P33241 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 TCF3P1-201ENST00000423021 1937 ntBASIC20.87■□□□□ 0.93
LSP1P33241 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.87■□□□□ 0.93
LSP1P33241 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.87■□□□□ 0.93
LSP1P33241 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LSP1P33241 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.87■□□□□ 0.93
LSP1P33241 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSP1P33241 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSP1P33241 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
LSP1P33241 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LSP1P33241 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.86■□□□□ 0.93
LSP1P33241 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.86■□□□□ 0.93
LSP1P33241 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.86■□□□□ 0.93
LSP1P33241 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LSP1P33241 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSP1P33241 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LSP1P33241 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LSP1P33241 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.86■□□□□ 0.93
LSP1P33241 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.86■□□□□ 0.93
LSP1P33241 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.86■□□□□ 0.93
LSP1P33241 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LSP1P33241 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.85■□□□□ 0.93
LSP1P33241 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.85■□□□□ 0.93
LSP1P33241 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 MIR6722-201ENST00000617286 78 ntBASIC20.85■□□□□ 0.93
LSP1P33241 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
LSP1P33241 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.85■□□□□ 0.93
LSP1P33241 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LSP1P33241 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
LSP1P33241 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSP1P33241 AC125437.2-201ENST00000625180 2167 ntBASIC20.85■□□□□ 0.93
LSP1P33241 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
LSP1P33241 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 AL158211.5-201ENST00000623583 2518 ntBASIC20.84■□□□□ 0.93
LSP1P33241 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 TSPY13P-201ENST00000338964 914 ntBASIC20.84■□□□□ 0.93
LSP1P33241 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.84■□□□□ 0.93
LSP1P33241 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LSP1P33241 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.84■□□□□ 0.93
LSP1P33241 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.84■□□□□ 0.93
LSP1P33241 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
LSP1P33241 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSP1P33241 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.84■□□□□ 0.93
LSP1P33241 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LSP1P33241 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LSP1P33241 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LSP1P33241 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
LSP1P33241 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSP1P33241 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LSP1P33241 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSP1P33241 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LSP1P33241 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.92
LSP1P33241 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.82■□□□□ 0.92
LSP1P33241 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 LETM1P2-201ENST00000597330 2178 ntBASIC20.82■□□□□ 0.92
LSP1P33241 FP700111.2-201ENST00000619190 1892 ntBASIC20.82■□□□□ 0.92
LSP1P33241 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.82■□□□□ 0.92
LSP1P33241 ATP5G2P3-201ENST00000429083 425 ntBASIC20.82■□□□□ 0.92
LSP1P33241 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.82■□□□□ 0.92
LSP1P33241 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.82■□□□□ 0.92
LSP1P33241 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LSP1P33241 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LSP1P33241 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSP1P33241 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms