Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
FREM3P0C091 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
FREM3P0C091 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.92■□□□□ 0.62
FREM3P0C091 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.92■□□□□ 0.62
FREM3P0C091 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
FREM3P0C091 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 SLC7A5P1-201ENST00000568957 537 ntBASIC18.92■□□□□ 0.62
FREM3P0C091 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.92■□□□□ 0.62
FREM3P0C091 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.92■□□□□ 0.62
FREM3P0C091 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
FREM3P0C091 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.91■□□□□ 0.62
FREM3P0C091 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.91■□□□□ 0.62
FREM3P0C091 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FREM3P0C091 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
FREM3P0C091 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.91■□□□□ 0.62
FREM3P0C091 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.91■□□□□ 0.62
FREM3P0C091 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.91■□□□□ 0.62
FREM3P0C091 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.91■□□□□ 0.62
FREM3P0C091 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.91■□□□□ 0.62
FREM3P0C091 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FREM3P0C091 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.91■□□□□ 0.62
FREM3P0C091 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.9■□□□□ 0.62
FREM3P0C091 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.9■□□□□ 0.62
FREM3P0C091 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.9■□□□□ 0.62
FREM3P0C091 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 TERF1P5-201ENST00000477545 1207 ntBASIC18.9■□□□□ 0.62
FREM3P0C091 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 AC133552.2-202ENST00000575694 574 ntBASIC18.9■□□□□ 0.62
FREM3P0C091 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.9■□□□□ 0.62
FREM3P0C091 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.9■□□□□ 0.62
FREM3P0C091 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
FREM3P0C091 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FREM3P0C091 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
FREM3P0C091 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FREM3P0C091 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
FREM3P0C091 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.89■□□□□ 0.62
FREM3P0C091 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FREM3P0C091 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FREM3P0C091 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.89■□□□□ 0.62
FREM3P0C091 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.89■□□□□ 0.62
FREM3P0C091 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FREM3P0C091 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
FREM3P0C091 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.89■□□□□ 0.61
FREM3P0C091 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
FREM3P0C091 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.89■□□□□ 0.61
FREM3P0C091 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.89■□□□□ 0.61
FREM3P0C091 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FREM3P0C091 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.89■□□□□ 0.61
FREM3P0C091 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.89■□□□□ 0.61
FREM3P0C091 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
FREM3P0C091 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.89■□□□□ 0.61
FREM3P0C091 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.89■□□□□ 0.61
FREM3P0C091 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FREM3P0C091 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.88■□□□□ 0.61
FREM3P0C091 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
FREM3P0C091 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FREM3P0C091 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FREM3P0C091 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.88■□□□□ 0.61
FREM3P0C091 AL162412.1-201ENST00000567129 965 ntBASIC18.88■□□□□ 0.61
FREM3P0C091 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms