Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.12■□□□□ 0.65
THBS1P07996 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.12■□□□□ 0.65
THBS1P07996 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
THBS1P07996 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 YBX1P1-201ENST00000445822 960 ntBASIC19.12■□□□□ 0.65
THBS1P07996 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.12■□□□□ 0.65
THBS1P07996 AC120498.10-201ENST00000621827 505 ntBASIC19.12■□□□□ 0.65
THBS1P07996 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
THBS1P07996 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
THBS1P07996 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 AC011484.1-201ENST00000377652 1995 ntBASIC19.12■□□□□ 0.65
THBS1P07996 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
THBS1P07996 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
THBS1P07996 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
THBS1P07996 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
THBS1P07996 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
THBS1P07996 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.11■□□□□ 0.65
THBS1P07996 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
THBS1P07996 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.11■□□□□ 0.65
THBS1P07996 TERF1P2-201ENST00000583350 1212 ntBASIC19.11■□□□□ 0.65
THBS1P07996 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
THBS1P07996 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.11■□□□□ 0.65
THBS1P07996 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
THBS1P07996 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.11■□□□□ 0.65
THBS1P07996 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
THBS1P07996 AL157384.1-201ENST00000445995 2473 ntBASIC19.1■□□□□ 0.65
THBS1P07996 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.1■□□□□ 0.65
THBS1P07996 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.1■□□□□ 0.65
THBS1P07996 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.1■□□□□ 0.65
THBS1P07996 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
THBS1P07996 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
THBS1P07996 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.1■□□□□ 0.65
THBS1P07996 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
THBS1P07996 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.09■□□□□ 0.65
THBS1P07996 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.09■□□□□ 0.65
THBS1P07996 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L2-201ENST00000561772 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L6-201ENST00000626483 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L1-201ENST00000627662 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L8-201ENST00000629013 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L3-201ENST00000630187 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L7-201ENST00000630678 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 DUX4L5-201ENST00000630834 1275 ntBASIC19.09■□□□□ 0.65
THBS1P07996 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
THBS1P07996 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
THBS1P07996 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
THBS1P07996 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.09■□□□□ 0.65
THBS1P07996 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
THBS1P07996 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
THBS1P07996 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
THBS1P07996 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.08■□□□□ 0.65
THBS1P07996 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
THBS1P07996 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
THBS1P07996 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.08■□□□□ 0.65
THBS1P07996 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
THBS1P07996 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.08■□□□□ 0.64
THBS1P07996 AC245052.3-201ENST00000450182 901 ntBASIC19.08■□□□□ 0.64
THBS1P07996 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
THBS1P07996 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.08■□□□□ 0.64
THBS1P07996 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.08■□□□□ 0.64
THBS1P07996 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.08■□□□□ 0.64
THBS1P07996 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
THBS1P07996 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms