Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.39■■□□□ 1.17
C4BPAP04003 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.39■■□□□ 1.17
C4BPAP04003 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
C4BPAP04003 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C4BPAP04003 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 CNN2P6-201ENST00000439038 900 ntBASIC22.38■■□□□ 1.17
C4BPAP04003 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.38■■□□□ 1.17
C4BPAP04003 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
C4BPAP04003 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.38■■□□□ 1.17
C4BPAP04003 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
C4BPAP04003 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4BPAP04003 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.38■■□□□ 1.17
C4BPAP04003 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.37■■□□□ 1.17
C4BPAP04003 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
C4BPAP04003 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
C4BPAP04003 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.36■■□□□ 1.17
C4BPAP04003 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.36■■□□□ 1.17
C4BPAP04003 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
C4BPAP04003 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.36■■□□□ 1.17
C4BPAP04003 AC080038.1-201ENST00000611274 1154 ntBASIC22.36■■□□□ 1.17
C4BPAP04003 PLK5-205ENST00000642079 1969 ntBASIC22.36■■□□□ 1.17
C4BPAP04003 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.35■■□□□ 1.17
C4BPAP04003 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.35■■□□□ 1.17
C4BPAP04003 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.35■■□□□ 1.17
C4BPAP04003 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 AC121338.2-201ENST00000622535 1744 ntBASIC22.35■■□□□ 1.17
C4BPAP04003 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
C4BPAP04003 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.35■■□□□ 1.17
C4BPAP04003 AC007322.4-201ENST00000509611 723 ntBASIC22.35■■□□□ 1.17
C4BPAP04003 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.35■■□□□ 1.17
C4BPAP04003 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.35■■□□□ 1.17
C4BPAP04003 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.35■■□□□ 1.17
C4BPAP04003 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 AC013268.1-206ENST00000638368 961 ntBASIC22.35■■□□□ 1.17
C4BPAP04003 AC112229.1-201ENST00000639295 961 ntBASIC22.35■■□□□ 1.17
C4BPAP04003 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
C4BPAP04003 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4BPAP04003 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C4BPAP04003 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
C4BPAP04003 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
C4BPAP04003 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.34■■□□□ 1.17
C4BPAP04003 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.34■■□□□ 1.17
C4BPAP04003 CDCA4P2-201ENST00000441182 718 ntBASIC22.34■■□□□ 1.17
C4BPAP04003 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.34■■□□□ 1.17
C4BPAP04003 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.34■■□□□ 1.17
C4BPAP04003 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.34■■□□□ 1.17
C4BPAP04003 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C4BPAP04003 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C4BPAP04003 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
C4BPAP04003 AC011484.1-201ENST00000377652 1995 ntBASIC22.34■■□□□ 1.17
C4BPAP04003 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4BPAP04003 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4BPAP04003 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4BPAP04003 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.33■■□□□ 1.17
C4BPAP04003 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
C4BPAP04003 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
C4BPAP04003 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
C4BPAP04003 AC073111.5-205ENST00000641717 521 ntBASIC22.33■■□□□ 1.17
C4BPAP04003 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4BPAP04003 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.33■■□□□ 1.17
C4BPAP04003 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
C4BPAP04003 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
C4BPAP04003 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
C4BPAP04003 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
C4BPAP04003 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms