Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND1P03886 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND1P03886 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND1P03886 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND1P03886 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND1P03886 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MT-ND1P03886 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.57■□□□□ 0.72
MT-ND1P03886 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND1P03886 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.57■□□□□ 0.72
MT-ND1P03886 AL034346.1-201ENST00000568244 1277 ntBASIC19.57■□□□□ 0.72
MT-ND1P03886 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MT-ND1P03886 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MT-ND1P03886 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND1P03886 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND1P03886 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.57■□□□□ 0.72
MT-ND1P03886 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.56■□□□□ 0.72
MT-ND1P03886 AC087289.5-201ENST00000586076 3175 ntBASIC19.56■□□□□ 0.72
MT-ND1P03886 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.56■□□□□ 0.72
MT-ND1P03886 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
MT-ND1P03886 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.56■□□□□ 0.72
MT-ND1P03886 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND1P03886 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MT-ND1P03886 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
MT-ND1P03886 AC131281.2-201ENST00000520478 145 ntBASIC19.55■□□□□ 0.72
MT-ND1P03886 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MT-ND1P03886 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND1P03886 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.55■□□□□ 0.72
MT-ND1P03886 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND1P03886 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND1P03886 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND1P03886 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND1P03886 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND1P03886 AC011298.3-201ENST00000615796 283 ntBASIC19.54■□□□□ 0.72
MT-ND1P03886 AC136469.2-201ENST00000623944 1028 ntBASIC19.54■□□□□ 0.72
MT-ND1P03886 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-ND1P03886 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND1P03886 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND1P03886 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND1P03886 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND1P03886 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND1P03886 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.53■□□□□ 0.72
MT-ND1P03886 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
MT-ND1P03886 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-ND1P03886 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND1P03886 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.53■□□□□ 0.72
MT-ND1P03886 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND1P03886 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND1P03886 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
MT-ND1P03886 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-ND1P03886 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
MT-ND1P03886 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND1P03886 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
MT-ND1P03886 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND1P03886 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND1P03886 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
MT-ND1P03886 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.52■□□□□ 0.71
MT-ND1P03886 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
MT-ND1P03886 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
MT-ND1P03886 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.52■□□□□ 0.71
MT-ND1P03886 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MT-ND1P03886 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.51■□□□□ 0.71
MT-ND1P03886 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.51■□□□□ 0.71
MT-ND1P03886 AC020907.5-201ENST00000624372 1936 ntBASIC19.51■□□□□ 0.71
MT-ND1P03886 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND1P03886 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms