Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN3O95197 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN3O95197 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN3O95197 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN3O95197 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN3O95197 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN3O95197 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.9■■□□□ 1.1
RTN3O95197 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.9■■□□□ 1.1
RTN3O95197 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN3O95197 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTN3O95197 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN3O95197 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.9■■□□□ 1.1
RTN3O95197 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.9■■□□□ 1.1
RTN3O95197 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.9■■□□□ 1.1
RTN3O95197 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN3O95197 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTN3O95197 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.1
RTN3O95197 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.89■■□□□ 1.1
RTN3O95197 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTN3O95197 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 AL355802.2-201ENST00000402069 882 ntBASIC21.89■■□□□ 1.09
RTN3O95197 GUSBP6-202ENST00000438529 1198 ntBASIC21.89■■□□□ 1.09
RTN3O95197 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTN3O95197 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
RTN3O95197 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN3O95197 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.89■■□□□ 1.09
RTN3O95197 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN3O95197 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN3O95197 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.88■■□□□ 1.09
RTN3O95197 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RTN3O95197 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTN3O95197 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RTN3O95197 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN3O95197 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RTN3O95197 AL512625.2-201ENST00000417533 625 ntBASIC21.88■■□□□ 1.09
RTN3O95197 AC091799.1-201ENST00000422823 811 ntBASIC21.88■■□□□ 1.09
RTN3O95197 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.88■■□□□ 1.09
RTN3O95197 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RTN3O95197 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.88■■□□□ 1.09
RTN3O95197 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RTN3O95197 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RTN3O95197 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.88■■□□□ 1.09
RTN3O95197 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN3O95197 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RTN3O95197 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.87■■□□□ 1.09
RTN3O95197 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.87■■□□□ 1.09
RTN3O95197 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.87■■□□□ 1.09
RTN3O95197 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RTN3O95197 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.87■■□□□ 1.09
RTN3O95197 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN3O95197 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN3O95197 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RTN3O95197 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN3O95197 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.87■■□□□ 1.09
RTN3O95197 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.87■■□□□ 1.09
RTN3O95197 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN3O95197 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
RTN3O95197 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN3O95197 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN3O95197 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RTN3O95197 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RTN3O95197 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
RTN3O95197 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RTN3O95197 EP400NL-214ENST00000641289 2402 ntBASIC21.86■■□□□ 1.09
RTN3O95197 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RTN3O95197 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 CDV3P1-201ENST00000471403 739 ntBASIC21.86■■□□□ 1.09
RTN3O95197 AC142086.2-201ENST00000569753 217 ntBASIC21.86■■□□□ 1.09
RTN3O95197 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.86■■□□□ 1.09
RTN3O95197 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.86■■□□□ 1.09
RTN3O95197 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.86■■□□□ 1.09
RTN3O95197 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
RTN3O95197 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN3O95197 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN3O95197 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN3O95197 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN3O95197 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
RTN3O95197 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RTN3O95197 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RTN3O95197 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTN3O95197 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
RTN3O95197 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.85■■□□□ 1.09
RTN3O95197 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN3O95197 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.85■■□□□ 1.09
RTN3O95197 RARRES2P4-201ENST00000514074 484 ntBASIC21.85■■□□□ 1.09
RTN3O95197 AC016405.3-201ENST00000607710 860 ntBASIC21.85■■□□□ 1.09
RTN3O95197 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms