Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RFPL1O75677 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.85■□□□□ 0.93
RFPL1O75677 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.85■□□□□ 0.93
RFPL1O75677 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 AC121338.2-201ENST00000622535 1744 ntBASIC20.85■□□□□ 0.93
RFPL1O75677 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RFPL1O75677 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RFPL1O75677 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.85■□□□□ 0.93
RFPL1O75677 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.85■□□□□ 0.93
RFPL1O75677 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.85■□□□□ 0.93
RFPL1O75677 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL1O75677 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.84■□□□□ 0.93
RFPL1O75677 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.84■□□□□ 0.93
RFPL1O75677 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RFPL1O75677 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.84■□□□□ 0.93
RFPL1O75677 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.84■□□□□ 0.93
RFPL1O75677 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
RFPL1O75677 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 AC027702.1-201ENST00000563810 1770 ntBASIC20.84■□□□□ 0.93
RFPL1O75677 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL1O75677 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RFPL1O75677 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.93
RFPL1O75677 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.83■□□□□ 0.93
RFPL1O75677 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.83■□□□□ 0.93
RFPL1O75677 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 AL121603.2-201ENST00000557373 2117 ntBASIC20.83■□□□□ 0.93
RFPL1O75677 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RFPL1O75677 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RFPL1O75677 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 AC027612.3-201ENST00000413684 1047 ntBASIC20.83■□□□□ 0.93
RFPL1O75677 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.83■□□□□ 0.93
RFPL1O75677 AC123595.1-201ENST00000440769 1046 ntBASIC20.83■□□□□ 0.93
RFPL1O75677 IGHV3-19-201ENST00000521488 291 ntBASIC20.83■□□□□ 0.93
RFPL1O75677 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.83■□□□□ 0.93
RFPL1O75677 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
RFPL1O75677 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.83■□□□□ 0.93
RFPL1O75677 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL1O75677 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RFPL1O75677 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFPL1O75677 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFPL1O75677 AC055733.4-201ENST00000638462 1354 ntBASIC20.83■□□□□ 0.92
RFPL1O75677 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFPL1O75677 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.92
RFPL1O75677 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RFPL1O75677 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFPL1O75677 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.82■□□□□ 0.92
RFPL1O75677 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.82■□□□□ 0.92
RFPL1O75677 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.82■□□□□ 0.92
RFPL1O75677 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L2-201ENST00000561772 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L6-201ENST00000626483 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L1-201ENST00000627662 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L8-201ENST00000629013 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L3-201ENST00000630187 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L7-201ENST00000630678 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 DUX4L5-201ENST00000630834 1275 ntBASIC20.82■□□□□ 0.92
RFPL1O75677 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.82■□□□□ 0.92
RFPL1O75677 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL1O75677 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.81■□□□□ 0.92
RFPL1O75677 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL1O75677 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RFPL1O75677 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.81■□□□□ 0.92
RFPL1O75677 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL1O75677 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RFPL1O75677 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL1O75677 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
RFPL1O75677 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RFPL1O75677 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL1O75677 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RFPL1O75677 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RFPL1O75677 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.81■□□□□ 0.92
RFPL1O75677 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms