Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM99A-202ENST00000538190 1989 ntBASIC19.32■□□□□ 0.68
TRIM3O75382 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRIM3O75382 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM3O75382 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM3O75382 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM3O75382 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 RNF165-205ENST00000588679 2904 ntBASIC19.32■□□□□ 0.68
TRIM3O75382 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM3O75382 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM3O75382 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM3O75382 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM3O75382 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM3O75382 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 AC026471.6-201ENST00000622954 1905 ntBASIC19.31■□□□□ 0.68
TRIM3O75382 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM3O75382 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM3O75382 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
TRIM3O75382 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM3O75382 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM3O75382 KRT18P20-201ENST00000548986 1279 ntBASIC19.31■□□□□ 0.68
TRIM3O75382 BID-214ENST00000617586 542 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM3O75382 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM3O75382 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM3O75382 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM3O75382 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM3O75382 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM3O75382 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM3O75382 UBE2DNL-204ENST00000602536 740 ntBASIC19.3■□□□□ 0.68
TRIM3O75382 AC080038.1-201ENST00000611274 1154 ntBASIC19.3■□□□□ 0.68
TRIM3O75382 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM3O75382 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM3O75382 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM3O75382 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM3O75382 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM3O75382 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM3O75382 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.29■□□□□ 0.68
TRIM3O75382 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM3O75382 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 AC090192.1-201ENST00000517740 490 ntBASIC19.29■□□□□ 0.68
TRIM3O75382 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TRIM3O75382 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM3O75382 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM3O75382 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM3O75382 AC010542.4-201ENST00000563151 1910 ntBASIC19.29■□□□□ 0.68
TRIM3O75382 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM3O75382 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM3O75382 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM3O75382 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM3O75382 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM3O75382 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.28■□□□□ 0.68
TRIM3O75382 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 AC011767.1-201ENST00000617410 1153 ntBASIC19.28■□□□□ 0.68
TRIM3O75382 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms