Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNT1O60563 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNT1O60563 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.63■■□□□ 1.37
CCNT1O60563 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNT1O60563 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNT1O60563 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.63■■□□□ 1.37
CCNT1O60563 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNT1O60563 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNT1O60563 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CCNT1O60563 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.63■■□□□ 1.37
CCNT1O60563 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNT1O60563 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CCNT1O60563 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CCNT1O60563 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNT1O60563 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CCNT1O60563 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNT1O60563 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.62■■□□□ 1.37
CCNT1O60563 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.62■■□□□ 1.37
CCNT1O60563 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNT1O60563 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNT1O60563 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.62■■□□□ 1.37
CCNT1O60563 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNT1O60563 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNT1O60563 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNT1O60563 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNT1O60563 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNT1O60563 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNT1O60563 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.61■■□□□ 1.37
CCNT1O60563 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNT1O60563 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.61■■□□□ 1.37
CCNT1O60563 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.61■■□□□ 1.37
CCNT1O60563 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 TERF1P5-201ENST00000477545 1207 ntBASIC23.61■■□□□ 1.37
CCNT1O60563 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.61■■□□□ 1.37
CCNT1O60563 AC243732.1-201ENST00000612648 864 ntBASIC23.61■■□□□ 1.37
CCNT1O60563 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CCNT1O60563 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNT1O60563 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CCNT1O60563 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCNT1O60563 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNT1O60563 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CCNT1O60563 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNT1O60563 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNT1O60563 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CCNT1O60563 DUX4L16-201ENST00000555130 1264 ntBASIC23.6■■□□□ 1.37
CCNT1O60563 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
CCNT1O60563 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.6■■□□□ 1.37
CCNT1O60563 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNT1O60563 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CCNT1O60563 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CCNT1O60563 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
CCNT1O60563 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.59■■□□□ 1.37
CCNT1O60563 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.59■■□□□ 1.37
CCNT1O60563 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.59■■□□□ 1.37
CCNT1O60563 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CCNT1O60563 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCNT1O60563 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCNT1O60563 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCNT1O60563 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.58■■□□□ 1.37
CCNT1O60563 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.58■■□□□ 1.37
CCNT1O60563 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.58■■□□□ 1.37
CCNT1O60563 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.58■■□□□ 1.37
CCNT1O60563 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CCNT1O60563 AC080038.1-201ENST00000611274 1154 ntBASIC23.58■■□□□ 1.37
CCNT1O60563 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CCNT1O60563 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
CCNT1O60563 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCNT1O60563 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CCNT1O60563 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.57■■□□□ 1.36
CCNT1O60563 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.57■■□□□ 1.36
CCNT1O60563 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms