Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 C2orf69P4-201ENST00000565394 541 ntBASIC19.67■□□□□ 0.74
URB1O60287 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.66■□□□□ 0.74
URB1O60287 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
URB1O60287 MTDHP1-201ENST00000605323 784 ntBASIC19.66■□□□□ 0.74
URB1O60287 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
URB1O60287 AC092368.3-202ENST00000574180 1591 ntBASIC19.66■□□□□ 0.74
URB1O60287 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
URB1O60287 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
URB1O60287 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
URB1O60287 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
URB1O60287 SOX15-203ENST00000570788 1093 ntBASIC19.65■□□□□ 0.74
URB1O60287 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
URB1O60287 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
URB1O60287 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
URB1O60287 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
URB1O60287 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
URB1O60287 AC133681.1-201ENST00000465482 601 ntBASIC19.65■□□□□ 0.74
URB1O60287 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.65■□□□□ 0.74
URB1O60287 AL589743.5-201ENST00000616611 1050 ntBASIC19.65■□□□□ 0.74
URB1O60287 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
URB1O60287 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.65■□□□□ 0.74
URB1O60287 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.65■□□□□ 0.74
URB1O60287 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
URB1O60287 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
URB1O60287 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
URB1O60287 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
URB1O60287 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
URB1O60287 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
URB1O60287 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.64■□□□□ 0.73
URB1O60287 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.64■□□□□ 0.73
URB1O60287 AL049597.2-201ENST00000565575 961 ntBASIC19.64■□□□□ 0.73
URB1O60287 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.64■□□□□ 0.73
URB1O60287 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
URB1O60287 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.63■□□□□ 0.73
URB1O60287 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.63■□□□□ 0.73
URB1O60287 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.63■□□□□ 0.73
URB1O60287 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.63■□□□□ 0.73
URB1O60287 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
URB1O60287 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
URB1O60287 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.62■□□□□ 0.73
URB1O60287 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.62■□□□□ 0.73
URB1O60287 CD177P1-201ENST00000606252 935 ntBASIC19.62■□□□□ 0.73
URB1O60287 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
URB1O60287 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.62■□□□□ 0.73
URB1O60287 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
URB1O60287 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
URB1O60287 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
URB1O60287 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.62■□□□□ 0.73
URB1O60287 AL353708.3-201ENST00000610272 989 ntBASIC19.62■□□□□ 0.73
URB1O60287 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.62■□□□□ 0.73
URB1O60287 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
URB1O60287 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.61■□□□□ 0.73
URB1O60287 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.61■□□□□ 0.73
URB1O60287 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.61■□□□□ 0.73
URB1O60287 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.61■□□□□ 0.73
URB1O60287 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
URB1O60287 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.61■□□□□ 0.73
URB1O60287 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.61■□□□□ 0.73
URB1O60287 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
URB1O60287 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
URB1O60287 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.6■□□□□ 0.73
URB1O60287 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms