Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.94■■□□□ 1.58
FOXN1O15353 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.94■■□□□ 1.58
FOXN1O15353 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.93■■□□□ 1.58
FOXN1O15353 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.93■■□□□ 1.58
FOXN1O15353 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.93■■□□□ 1.58
FOXN1O15353 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.93■■□□□ 1.58
FOXN1O15353 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.93■■□□□ 1.58
FOXN1O15353 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.93■■□□□ 1.58
FOXN1O15353 AL590326.2-201ENST00000625139 305 ntBASIC24.93■■□□□ 1.58
FOXN1O15353 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
FOXN1O15353 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.92■■□□□ 1.58
FOXN1O15353 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 POU5F1P4-201ENST00000413175 1085 ntBASIC24.92■■□□□ 1.58
FOXN1O15353 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
FOXN1O15353 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.92■■□□□ 1.58
FOXN1O15353 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
FOXN1O15353 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
FOXN1O15353 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
FOXN1O15353 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
FOXN1O15353 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
FOXN1O15353 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
FOXN1O15353 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.91■■□□□ 1.58
FOXN1O15353 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.91■■□□□ 1.58
FOXN1O15353 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.91■■□□□ 1.58
FOXN1O15353 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.91■■□□□ 1.58
FOXN1O15353 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
FOXN1O15353 AL049597.2-201ENST00000565575 961 ntBASIC24.91■■□□□ 1.58
FOXN1O15353 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 AC087742.1-201ENST00000575880 1738 ntBASIC24.91■■□□□ 1.58
FOXN1O15353 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
FOXN1O15353 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
FOXN1O15353 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 AC012618.2-201ENST00000428058 849 ntBASIC24.9■■□□□ 1.58
FOXN1O15353 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.9■■□□□ 1.58
FOXN1O15353 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.9■■□□□ 1.58
FOXN1O15353 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
FOXN1O15353 AC080038.3-201ENST00000623346 1952 ntBASIC24.89■■□□□ 1.58
FOXN1O15353 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
FOXN1O15353 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.89■■□□□ 1.58
FOXN1O15353 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
FOXN1O15353 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.89■■□□□ 1.58
FOXN1O15353 AC233702.5-201ENST00000584107 538 ntBASIC24.89■■□□□ 1.58
FOXN1O15353 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
FOXN1O15353 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
FOXN1O15353 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
FOXN1O15353 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.89■■□□□ 1.57
FOXN1O15353 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.89■■□□□ 1.57
FOXN1O15353 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
FOXN1O15353 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
FOXN1O15353 CLDN5-201ENST00000403084 2357 ntBASIC24.88■■□□□ 1.57
FOXN1O15353 AC127496.7-201ENST00000625110 1798 ntBASIC24.88■■□□□ 1.57
FOXN1O15353 AC004687.1-201ENST00000579003 1625 ntBASIC24.88■■□□□ 1.57
FOXN1O15353 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.88■■□□□ 1.57
FOXN1O15353 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.88■■□□□ 1.57
FOXN1O15353 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC24.88■■□□□ 1.57
FOXN1O15353 AC233263.1-201ENST00000578059 224 ntBASIC24.88■■□□□ 1.57
FOXN1O15353 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.88■■□□□ 1.57
FOXN1O15353 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXN1O15353 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
FOXN1O15353 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.87■■□□□ 1.57
FOXN1O15353 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.87■■□□□ 1.57
FOXN1O15353 KRT17P3-201ENST00000420566 1262 ntBASIC24.87■■□□□ 1.57
FOXN1O15353 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms