Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHUKO15111 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.29■■□□□ 1
CHUKO15111 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.29■■□□□ 1
CHUKO15111 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
CHUKO15111 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.29■■□□□ 1
CHUKO15111 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CHUKO15111 LINC02228-203ENST00000641970 1355 ntBASIC21.29■■□□□ 1
CHUKO15111 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHUKO15111 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CHUKO15111 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.29■■□□□ 1
CHUKO15111 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CHUKO15111 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.29■■□□□ 1
CHUKO15111 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.29■■□□□ 1
CHUKO15111 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHUKO15111 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.28■■□□□ 1
CHUKO15111 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CHUKO15111 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.28■■□□□ 1
CHUKO15111 TERF1P2-201ENST00000583350 1212 ntBASIC21.28■■□□□ 1
CHUKO15111 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHUKO15111 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.28■■□□□ 1
CHUKO15111 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.28■■□□□ 1
CHUKO15111 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.28■■□□□ 1
CHUKO15111 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHUKO15111 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CHUKO15111 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHUKO15111 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.27■■□□□ 1
CHUKO15111 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.27■■□□□ 1
CHUKO15111 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHUKO15111 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHUKO15111 OR7E47P-201ENST00000546390 1422 ntBASIC21.27■■□□□ 1
CHUKO15111 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHUKO15111 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CHUKO15111 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.26■□□□□ 0.99
CHUKO15111 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.26■□□□□ 0.99
CHUKO15111 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.26■□□□□ 0.99
CHUKO15111 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.26■□□□□ 0.99
CHUKO15111 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.26■□□□□ 0.99
CHUKO15111 CCDC92B-201ENST00000575506 885 ntBASIC21.26■□□□□ 0.99
CHUKO15111 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHUKO15111 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CHUKO15111 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHUKO15111 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CHUKO15111 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHUKO15111 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 AC034268.1-201ENST00000441047 882 ntBASIC21.25■□□□□ 0.99
CHUKO15111 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.25■□□□□ 0.99
CHUKO15111 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
CHUKO15111 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHUKO15111 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.24■□□□□ 0.99
CHUKO15111 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CHUKO15111 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHUKO15111 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHUKO15111 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHUKO15111 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHUKO15111 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L2-201ENST00000561772 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.24■□□□□ 0.99
CHUKO15111 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L6-201ENST00000626483 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L1-201ENST00000627662 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L8-201ENST00000629013 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L3-201ENST00000630187 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L7-201ENST00000630678 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 DUX4L5-201ENST00000630834 1275 ntBASIC21.24■□□□□ 0.99
CHUKO15111 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms