Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN4O14817 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TSPAN4O14817 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.32■□□□□ 0.36
TSPAN4O14817 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN4O14817 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 AC004448.1-201ENST00000458332 883 ntBASIC17.32■□□□□ 0.36
TSPAN4O14817 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TSPAN4O14817 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TSPAN4O14817 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN4O14817 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN4O14817 AC131274.2-201ENST00000580697 1507 ntBASIC17.31■□□□□ 0.36
TSPAN4O14817 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TSPAN4O14817 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TSPAN4O14817 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.31■□□□□ 0.36
TSPAN4O14817 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 GUSBP5-201ENST00000418136 578 ntBASIC17.31■□□□□ 0.36
TSPAN4O14817 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.31■□□□□ 0.36
TSPAN4O14817 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TSPAN4O14817 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TSPAN4O14817 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TSPAN4O14817 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN4O14817 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.31■□□□□ 0.36
TSPAN4O14817 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.3■□□□□ 0.36
TSPAN4O14817 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 SNX5-217ENST00000606557 1087 ntBASIC17.3■□□□□ 0.36
TSPAN4O14817 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TSPAN4O14817 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TSPAN4O14817 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.3■□□□□ 0.36
TSPAN4O14817 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN4O14817 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.3■□□□□ 0.36
TSPAN4O14817 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN4O14817 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TSPAN4O14817 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TSPAN4O14817 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TSPAN4O14817 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TSPAN4O14817 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.29■□□□□ 0.36
TSPAN4O14817 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
TSPAN4O14817 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.29■□□□□ 0.36
TSPAN4O14817 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.29■□□□□ 0.36
TSPAN4O14817 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TSPAN4O14817 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN4O14817 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.29■□□□□ 0.36
TSPAN4O14817 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.29■□□□□ 0.36
TSPAN4O14817 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms