Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA4O00483 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA4O00483 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA4O00483 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA4O00483 AC026271.2-201ENST00000428091 497 ntBASIC15.95■□□□□ 0.14
NDUFA4O00483 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA4O00483 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NDUFA4O00483 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NDUFA4O00483 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.94■□□□□ 0.14
NDUFA4O00483 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.94■□□□□ 0.14
NDUFA4O00483 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.94■□□□□ 0.14
NDUFA4O00483 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.94■□□□□ 0.14
NDUFA4O00483 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NDUFA4O00483 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.94■□□□□ 0.14
NDUFA4O00483 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NDUFA4O00483 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NDUFA4O00483 AC121338.2-201ENST00000622535 1744 ntBASIC15.94■□□□□ 0.14
NDUFA4O00483 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.94■□□□□ 0.14
NDUFA4O00483 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA4O00483 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.93■□□□□ 0.14
NDUFA4O00483 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.93■□□□□ 0.14
NDUFA4O00483 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.93■□□□□ 0.14
NDUFA4O00483 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
NDUFA4O00483 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NDUFA4O00483 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.93■□□□□ 0.14
NDUFA4O00483 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.93■□□□□ 0.14
NDUFA4O00483 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.93■□□□□ 0.14
NDUFA4O00483 KRT18P61-201ENST00000585825 1298 ntBASIC15.93■□□□□ 0.14
NDUFA4O00483 MIR5787-201ENST00000611784 55 ntBASIC15.93■□□□□ 0.14
NDUFA4O00483 RARRES2P11-201ENST00000635158 484 ntBASIC15.93■□□□□ 0.14
NDUFA4O00483 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA4O00483 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.93■□□□□ 0.14
NDUFA4O00483 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NDUFA4O00483 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.93■□□□□ 0.14
NDUFA4O00483 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.93■□□□□ 0.14
NDUFA4O00483 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NDUFA4O00483 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.92■□□□□ 0.14
NDUFA4O00483 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NDUFA4O00483 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.92■□□□□ 0.14
NDUFA4O00483 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NDUFA4O00483 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.92■□□□□ 0.14
NDUFA4O00483 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 KRT18P11-201ENST00000435214 1283 ntBASIC15.92■□□□□ 0.14
NDUFA4O00483 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
NDUFA4O00483 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.92■□□□□ 0.14
NDUFA4O00483 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.92■□□□□ 0.14
NDUFA4O00483 AC243732.1-201ENST00000612648 864 ntBASIC15.92■□□□□ 0.14
NDUFA4O00483 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.92■□□□□ 0.14
NDUFA4O00483 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.92■□□□□ 0.14
NDUFA4O00483 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA4O00483 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.91■□□□□ 0.14
NDUFA4O00483 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NDUFA4O00483 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA4O00483 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA4O00483 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
NDUFA4O00483 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
NDUFA4O00483 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.91■□□□□ 0.14
NDUFA4O00483 KRT18P5-201ENST00000436075 1291 ntBASIC15.91■□□□□ 0.14
NDUFA4O00483 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA4O00483 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.91■□□□□ 0.14
NDUFA4O00483 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA4O00483 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA4O00483 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.91■□□□□ 0.14
NDUFA4O00483 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA4O00483 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
NDUFA4O00483 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA4O00483 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms