Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC7O00311 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDC7O00311 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC7O00311 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDC7O00311 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.39■□□□□ 0.86
CDC7O00311 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDC7O00311 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC7O00311 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC7O00311 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.39■□□□□ 0.85
CDC7O00311 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC7O00311 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC7O00311 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC7O00311 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC7O00311 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC7O00311 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CDC7O00311 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CDC7O00311 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 FEM1AP1-201ENST00000431297 1995 ntBASIC20.38■□□□□ 0.85
CDC7O00311 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.38■□□□□ 0.85
CDC7O00311 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDC7O00311 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC7O00311 AC010141.2-201ENST00000452426 721 ntBASIC20.38■□□□□ 0.85
CDC7O00311 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.38■□□□□ 0.85
CDC7O00311 KRT18P14-201ENST00000534205 1250 ntBASIC20.38■□□□□ 0.85
CDC7O00311 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC7O00311 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.38■□□□□ 0.85
CDC7O00311 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
CDC7O00311 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC7O00311 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDC7O00311 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDC7O00311 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDC7O00311 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC7O00311 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDC7O00311 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC7O00311 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC7O00311 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.37■□□□□ 0.85
CDC7O00311 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC7O00311 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDC7O00311 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC7O00311 LINC01006-201ENST00000333319 2292 ntBASIC20.37■□□□□ 0.85
CDC7O00311 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC7O00311 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDC7O00311 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC7O00311 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC7O00311 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC7O00311 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDC7O00311 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC7O00311 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDC7O00311 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.35■□□□□ 0.85
CDC7O00311 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 SLC7A5P2-201ENST00000553010 536 ntBASIC20.35■□□□□ 0.85
CDC7O00311 AP001160.3-201ENST00000601484 763 ntBASIC20.35■□□□□ 0.85
CDC7O00311 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC7O00311 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC7O00311 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC7O00311 AC004854.2-201ENST00000608450 1441 ntBASIC20.35■□□□□ 0.85
CDC7O00311 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC7O00311 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CDC7O00311 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC7O00311 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDC7O00311 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L2-201ENST00000561772 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.34■□□□□ 0.85
CDC7O00311 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.34■□□□□ 0.85
CDC7O00311 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms