Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3B1O00203 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.98■□□□□ 0.95
AP3B1O00203 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.98■□□□□ 0.95
AP3B1O00203 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.98■□□□□ 0.95
AP3B1O00203 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3B1O00203 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3B1O00203 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
AP3B1O00203 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
AP3B1O00203 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.97■□□□□ 0.95
AP3B1O00203 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.97■□□□□ 0.95
AP3B1O00203 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
AP3B1O00203 AC010141.2-201ENST00000452426 721 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L2-201ENST00000561772 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L6-201ENST00000626483 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L1-201ENST00000627662 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L8-201ENST00000629013 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L3-201ENST00000630187 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L7-201ENST00000630678 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 DUX4L5-201ENST00000630834 1275 ntBASIC20.97■□□□□ 0.95
AP3B1O00203 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP3B1O00203 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.97■□□□□ 0.95
AP3B1O00203 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3B1O00203 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3B1O00203 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
AP3B1O00203 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3B1O00203 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.96■□□□□ 0.95
AP3B1O00203 YBX1P1-201ENST00000445822 960 ntBASIC20.96■□□□□ 0.95
AP3B1O00203 AC245052.3-201ENST00000450182 901 ntBASIC20.96■□□□□ 0.95
AP3B1O00203 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
AP3B1O00203 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
AP3B1O00203 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3B1O00203 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.96■□□□□ 0.95
AP3B1O00203 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
AP3B1O00203 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3B1O00203 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
AP3B1O00203 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3B1O00203 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
AP3B1O00203 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
AP3B1O00203 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3B1O00203 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 KRT18P20-201ENST00000548986 1279 ntBASIC20.95■□□□□ 0.94
AP3B1O00203 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.95■□□□□ 0.94
AP3B1O00203 FEM1AP1-201ENST00000431297 1995 ntBASIC20.95■□□□□ 0.94
AP3B1O00203 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3B1O00203 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP3B1O00203 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3B1O00203 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.94■□□□□ 0.94
AP3B1O00203 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
AP3B1O00203 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
AP3B1O00203 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.94■□□□□ 0.94
AP3B1O00203 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3B1O00203 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 TERF1P2-201ENST00000583350 1212 ntBASIC20.94■□□□□ 0.94
AP3B1O00203 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3B1O00203 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.94■□□□□ 0.94
AP3B1O00203 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
AP3B1O00203 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
AP3B1O00203 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
AP3B1O00203 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
AP3B1O00203 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3B1O00203 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3B1O00203 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP3B1O00203 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3B1O00203 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
AP3B1O00203 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3B1O00203 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms