Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.7■□□□□ 0.91
CFAP99D6REC4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.7■□□□□ 0.91
CFAP99D6REC4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.7■□□□□ 0.9
CFAP99D6REC4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.7■□□□□ 0.9
CFAP99D6REC4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CFAP99D6REC4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP99D6REC4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.69■□□□□ 0.9
CFAP99D6REC4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CFAP99D6REC4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP99D6REC4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.68■□□□□ 0.9
CFAP99D6REC4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP99D6REC4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP99D6REC4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP99D6REC4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP99D6REC4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP99D6REC4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP99D6REC4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 UBE2DNL-204ENST00000602536 740 ntBASIC20.67■□□□□ 0.9
CFAP99D6REC4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP99D6REC4 MYCNOS-205ENST00000641950 531 ntBASIC20.67■□□□□ 0.9
CFAP99D6REC4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP99D6REC4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP99D6REC4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CFAP99D6REC4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CFAP99D6REC4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP99D6REC4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP99D6REC4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CFAP99D6REC4 AC245052.3-201ENST00000450182 901 ntBASIC20.66■□□□□ 0.9
CFAP99D6REC4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP99D6REC4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.66■□□□□ 0.9
CFAP99D6REC4 AC022517.1-201ENST00000592429 346 ntBASIC20.66■□□□□ 0.9
CFAP99D6REC4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.66■□□□□ 0.9
CFAP99D6REC4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP99D6REC4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP99D6REC4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP99D6REC4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP99D6REC4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP99D6REC4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP99D6REC4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP99D6REC4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP99D6REC4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP99D6REC4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CFAP99D6REC4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP99D6REC4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.64■□□□□ 0.89
CFAP99D6REC4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP99D6REC4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms