Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 GPX1-201ENST00000419349 1106 ntBASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 AC022616.5-201ENST00000518796 181 ntBASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MIR6765-201ENST00000614092 87 ntBASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RBFOX3A6NFN3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 OR7E47P-201ENST00000546390 1422 ntBASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.41■□□□□ 0.22
RBFOX3A6NFN3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 AL592293.1-201ENST00000502889 1188 ntBASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX3A6NFN3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX3A6NFN3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms