Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC061975.6-201ENST00000579045 1553 ntBASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV3-43A0A0B4J1X8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC027612.3-201ENST00000413684 1047 ntBASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC053503.5-201ENST00000601508 636 ntBASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 KRT87P-202ENST00000534226 1464 ntBASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.21■□□□□ 0.35
IGHV3-43A0A0B4J1X8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
IGHV3-43A0A0B4J1X8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.21■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.21■□□□□ 0.34
IGHV3-43A0A0B4J1X8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 ZNRF2P3-201ENST00000424200 374 ntBASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 PLK5-205ENST00000642079 1969 ntBASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
IGHV3-43A0A0B4J1X8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 LINC02228-203ENST00000641970 1355 ntBASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43A0A0B4J1X8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms