Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3DA0A087WVF3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3DA0A087WVF3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.74■□□□□ 0.91
TBC1D3DA0A087WVF3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3DA0A087WVF3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3DA0A087WVF3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3DA0A087WVF3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3DA0A087WVF3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 KRT18P29-201ENST00000397031 1267 ntBASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 AC100791.3-201ENST00000617619 330 ntBASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 KRT17P1-201ENST00000399211 1546 ntBASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3DA0A087WVF3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 AC007322.3-201ENST00000426526 701 ntBASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 CYP2T3P-201ENST00000601990 817 ntBASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TBC1D3DA0A087WVF3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
TBC1D3DA0A087WVF3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.91
TBC1D3DA0A087WVF3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3DA0A087WVF3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 ITM2C-210ENST00000620962 501 ntBASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3DA0A087WVF3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3DA0A087WVF3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms