Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC131025.2-201ENST00000622374 422 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ARL17B-208ENST00000622877 565 ntTSL 4 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 C6orf203-204ENST00000625458 1146 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC068631.1-207ENST00000630315 821 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ATP2B3-205ENST00000393842 4064 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 BACH2-202ENST00000343122 3981 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ZNF226-215ENST00000590089 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC020661.5-201ENST00000624853 1854 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 PTPN20-225ENST00000511769 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 SLC6A2-202ENST00000379906 3551 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 LRRC7-204ENST00000415775 3996 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 OR52N2-201ENST00000317037 1035 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 SNORA71E-201ENST00000365032 132 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC114402.1-201ENST00000427282 328 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AL133406.2-201ENST00000452363 1198 ntTSL 2 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 BX842568.2-201ENST00000453595 1230 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 BX322234.2-201ENST00000457833 654 ntTSL 3 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 RPSAP55-201ENST00000477347 876 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 RN7SL108P-201ENST00000481903 297 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC055748.1-201ENST00000489836 959 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC104116.1-201ENST00000504539 411 ntTSL 5 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC245052.6-201ENST00000506567 219 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 PPBPP2-202ENST00000514391 346 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC025437.6-201ENST00000518624 935 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC007922.1-201ENST00000583122 459 ntTSL 2 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 ORMDL3-208ENST00000584220 414 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC008555.5-201ENST00000603718 515 ntTSL 2 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 Metazoa_SRP.133-201ENST00000612964 317 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AL138828.1-206ENST00000625353 811 ntTSL 5 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AL021368.4-201ENST00000637710 675 ntTSL 3 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 BRD7P4-201ENST00000406170 1522 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 LILRB1-204ENST00000396327 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 NBPF9-201ENST00000483630 1915 ntTSL 5 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 AC005176.1-201ENST00000594263 1831 ntTSL 2 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 TRIM51JP-201ENST00000443564 1320 ntBASIC10.56□□□□□ -0.72
LMO3Q8TAP4 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 MOV10L1-210ENST00000545383 3889 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
LMO3Q8TAP4 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 NTRK2-204ENST00000359847 6646 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 SEC14L6-201ENST00000402034 3392 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AC138749.1-201ENST00000567652 2472 ntBASIC10.55□□□□□ -0.72
LMO3Q8TAP4 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 DEFA1-202ENST00000382692 485 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AL162431.1-202ENST00000422858 444 ntTSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AP001330.1-201ENST00000524287 731 ntTSL 3 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 RPS26-203ENST00000552361 623 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AC122108.1-201ENST00000558419 424 ntTSL 5 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AC098847.2-202ENST00000592549 959 ntBASIC10.55□□□□□ -0.72
LMO3Q8TAP4 Z69706.1-201ENST00000595428 547 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms