Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PCGF7P-201ENST00000595406 1051 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC137630.4-201ENST00000609473 479 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC132807.2-202ENST00000616960 339 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AL358613.2-201ENST00000624651 567 ntTSL 4 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 DPCD-206ENST00000626968 541 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC008739.5-201ENST00000623035 1938 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 LCA5L-202ENST00000358268 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 HAPLN1-201ENST00000274341 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 EPHA6-209ENST00000514100 1682 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PGA4-201ENST00000378149 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PNPLA8-203ENST00000422087 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PIK3R1-216ENST00000523872 2473 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 CHEK2-208ENST00000404276 1785 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 EIF4BP5-201ENST00000567338 1795 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 MILR1-206ENST00000619286 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC108215.1-201ENST00000624463 3226 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 ZC3H14-211ENST00000555755 2529 ntAPPRIS ALT1 TSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 OR4K16P-202ENST00000641135 1506 ntBASIC9.21□□□□□ -0.93
SNX18Q96RF0 APPL2-202ENST00000539978 2680 ntTSL 2 BASIC9.21□□□□□ -0.93
SNX18Q96RF0 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.21□□□□□ -0.93
SNX18Q96RF0 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 ADHFE1-204ENST00000415254 1956 ntTSL 5 BASIC9.21□□□□□ -0.93
SNX18Q96RF0 ZNF195-205ENST00000399602 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
SNX18Q96RF0 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 AC007424.1-201ENST00000552582 1641 ntTSL 2 BASIC9.21□□□□□ -0.93
SNX18Q96RF0 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 GNPDA2-203ENST00000507917 2074 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SNX18Q96RF0 PKMP2-201ENST00000412159 1677 ntBASIC9.21□□□□□ -0.93
SNX18Q96RF0 S100A1-201ENST00000292169 594 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC234582.1-206ENST00000430312 845 ntTSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AL136376.1-201ENST00000449303 515 ntTSL 3 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC092944.1-203ENST00000488040 567 ntTSL 4 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 RN7SL625P-201ENST00000488637 291 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC055733.1-201ENST00000506407 572 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 PCSK6-AS1-201ENST00000558696 639 ntTSL 3 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC133548.1-201ENST00000562853 242 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 LINC02166-201ENST00000567544 721 ntTSL 3 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 FAM192A-220ENST00000569266 981 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC115989.1-201ENST00000574288 491 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 RN7SL96P-201ENST00000582641 283 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC021534.1-201ENST00000583980 547 ntTSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 TTN-AS1-231ENST00000589434 1066 ntTSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 FAM95B1-213ENST00000593047 767 ntTSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AL138966.1-201ENST00000603212 313 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 ACTG1P22-201ENST00000603793 1099 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 ENPP7P7-201ENST00000611822 1102 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 MIR6749-201ENST00000617008 69 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 CYP2F2P-202ENST00000641827 1004 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 LINC01055-201ENST00000435067 1721 ntTSL 3 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 STRADA-229ENST00000638698 1302 ntTSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 OXGR1-201ENST00000298440 2285 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 OR2AJ1-201ENST00000318244 1873 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 FCAR-209ENST00000469767 1432 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AC010207.1-201ENST00000568384 1946 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 SIAE-205ENST00000545756 2921 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC9.21□□□□□ -0.94
SNX18Q96RF0 CSRP3-202ENST00000533783 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 AL160274.1-201ENST00000623623 1515 ntBASIC9.21□□□□□ -0.94
SNX18Q96RF0 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SNX18Q96RF0 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 MAPK10-346ENST00000641737 2633 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms