Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 AL591742.1-201ENST00000604433 565 ntBASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 AC083880.1-201ENST00000608266 535 ntBASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA9Q9Y5G4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 AC243732.1-201ENST00000612648 864 ntBASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 SLC25A24-204ENST00000569674 2357 ntBASIC19.47■□□□□ 0.71
PCDHGA9Q9Y5G4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 AP006294.2-201ENST00000641667 209 ntBASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA9Q9Y5G4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 AC091874.3-201ENST00000512672 1195 ntBASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA9Q9Y5G4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 RBM17P2-201ENST00000616397 1405 ntBASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 AC139530.1-201ENST00000575312 1977 ntBASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGA9Q9Y5G4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 AC010980.2-201ENST00000587099 1412 ntBASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms