Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 AC008694.1-202ENST00000636953 945 ntBASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PCDHB2Q9Y5E7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 AC069152.1-201ENST00000438030 544 ntBASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 AC069236.1-201ENST00000604339 616 ntBASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 AC016405.3-201ENST00000607710 860 ntBASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 AC243732.1-201ENST00000612648 864 ntBASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 AC244015.2-201ENST00000616358 1861 ntBASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PCDHB2Q9Y5E7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 MKRN4P-201ENST00000444706 1521 ntBASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 AC093787.1-201ENST00000450396 207 ntBASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 CD99P1-205ENST00000527459 561 ntBASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB2Q9Y5E7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 AC098934.4-201ENST00000564127 592 ntBASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 AL591742.1-201ENST00000604433 565 ntBASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 AC133041.1-202ENST00000642053 222 ntBASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB2Q9Y5E7 CLDN5-201ENST00000403084 2357 ntBASIC22.83■■□□□ 1.24
PCDHB2Q9Y5E7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 MIPEPP3-201ENST00000412105 444 ntBASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 AL512625.2-201ENST00000417533 625 ntBASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 AC073210.2-201ENST00000430369 194 ntBASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 KRT18P6-201ENST00000555540 1265 ntBASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHB2Q9Y5E7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 ABHD17AP1-201ENST00000358206 933 ntBASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 AL162412.1-201ENST00000567129 965 ntBASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB2Q9Y5E7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms