Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.51■■□□□ 1.83
RTCBQ9Y3I0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 AC007322.3-201ENST00000426526 701 ntBASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 LINC01023-201ENST00000606054 436 ntBASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 C11orf96-202ENST00000528572 1834 ntBASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.5■■□□□ 1.83
RTCBQ9Y3I0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 AC092053.2-201ENST00000640557 1818 ntBASIC26.49■■□□□ 1.83
RTCBQ9Y3I0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 AC093323.1-202ENST00000635031 2045 ntBASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTCBQ9Y3I0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTCBQ9Y3I0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 AC010331.1-201ENST00000611423 582 ntBASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 CYP21A1P-202ENST00000354927 1481 ntBASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.46■■□□□ 1.83
RTCBQ9Y3I0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RTCBQ9Y3I0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
RTCBQ9Y3I0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 AC012618.2-201ENST00000428058 849 ntBASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 BX088651.1-201ENST00000540551 451 ntBASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTCBQ9Y3I0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms