Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF6Q9Y252 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RNF6Q9Y252 ID1-201ENST00000376105 1233 ntBASIC19.56■□□□□ 0.72
RNF6Q9Y252 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF6Q9Y252 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF6Q9Y252 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.56■□□□□ 0.72
RNF6Q9Y252 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RNF6Q9Y252 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RNF6Q9Y252 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF6Q9Y252 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF6Q9Y252 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF6Q9Y252 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF6Q9Y252 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF6Q9Y252 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
RNF6Q9Y252 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF6Q9Y252 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RNF6Q9Y252 RNF165-205ENST00000588679 2904 ntBASIC19.55■□□□□ 0.72
RNF6Q9Y252 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.55■□□□□ 0.72
RNF6Q9Y252 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF6Q9Y252 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF6Q9Y252 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF6Q9Y252 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF6Q9Y252 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF6Q9Y252 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF6Q9Y252 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF6Q9Y252 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF6Q9Y252 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF6Q9Y252 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF6Q9Y252 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF6Q9Y252 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF6Q9Y252 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF6Q9Y252 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF6Q9Y252 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF6Q9Y252 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF6Q9Y252 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF6Q9Y252 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF6Q9Y252 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF6Q9Y252 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF6Q9Y252 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF6Q9Y252 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms