Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 CDV3P1-201ENST00000471403 739 ntBASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 RARRES2P4-201ENST00000514074 484 ntBASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 AC016405.3-201ENST00000607710 860 ntBASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBQLN1Q9UMX0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 AC093787.1-201ENST00000450396 207 ntBASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 AC142086.2-201ENST00000569753 217 ntBASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 FAM21FP-204ENST00000608637 956 ntBASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
UBQLN1Q9UMX0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 MKRN4P-201ENST00000444706 1521 ntBASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.4■■□□□ 1.18
UBQLN1Q9UMX0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.39■■□□□ 1.18
UBQLN1Q9UMX0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
UBQLN1Q9UMX0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.39■■□□□ 1.18
UBQLN1Q9UMX0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
UBQLN1Q9UMX0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBQLN1Q9UMX0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
UBQLN1Q9UMX0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 Z98882.1-201ENST00000622160 2253 ntBASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
UBQLN1Q9UMX0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 AC007322.3-201ENST00000426526 701 ntBASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms