Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 AL049597.2-201ENST00000565575 961 ntBASIC19.62■□□□□ 0.73
DKK4Q9UBT3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DKK4Q9UBT3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 PRKY-204ENST00000533551 1019 ntBASIC19.61■□□□□ 0.73
DKK4Q9UBT3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 AL353708.3-201ENST00000610272 989 ntBASIC19.61■□□□□ 0.73
DKK4Q9UBT3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DKK4Q9UBT3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 AC245052.3-201ENST00000450182 901 ntBASIC19.6■□□□□ 0.73
DKK4Q9UBT3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 C2orf69P4-201ENST00000565394 541 ntBASIC19.6■□□□□ 0.73
DKK4Q9UBT3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 AL023875.1-201ENST00000640777 796 ntBASIC19.6■□□□□ 0.73
DKK4Q9UBT3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.6■□□□□ 0.73
DKK4Q9UBT3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DKK4Q9UBT3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.58■□□□□ 0.73
DKK4Q9UBT3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DKK4Q9UBT3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DKK4Q9UBT3 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.58■□□□□ 0.72
DKK4Q9UBT3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.58■□□□□ 0.72
DKK4Q9UBT3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.58■□□□□ 0.72
DKK4Q9UBT3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms