Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 FAM21FP-204ENST00000608637 956 ntBASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 GUSBP5-202ENST00000510805 1989 ntBASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRIT1Q9P2V4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 AC242852.2-201ENST00000615738 1807 ntBASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRIT1Q9P2V4 AL117328.2-201ENST00000624617 1940 ntBASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.17■□□□□ 0.82
LRIT1Q9P2V4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 KRT18P29-201ENST00000397031 1267 ntBASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 AL355472.2-201ENST00000422958 438 ntBASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRIT1Q9P2V4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 AC066615.1-201ENST00000640911 628 ntBASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRIT1Q9P2V4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRIT1Q9P2V4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRIT1Q9P2V4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms