Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN3Q9NQS3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 EEF1DP3-203ENST00000566025 782 ntBASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN3Q9NQS3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 KRT19P1-201ENST00000405746 1186 ntBASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NECTIN3Q9NQS3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NECTIN3Q9NQS3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 AC053503.5-201ENST00000601508 636 ntBASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NECTIN3Q9NQS3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 LINC01521-201ENST00000504184 1943 ntBASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
NECTIN3Q9NQS3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NECTIN3Q9NQS3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms